Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC008945.1-201ENST00000505144 499 ntBASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 RNU6-347P-201ENST00000516658 105 ntBASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 Y_RNA.712-201ENST00000517011 92 ntBASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 AC023575.1-201ENST00000580510 358 ntBASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 AC023043.3-201ENST00000593113 385 ntBASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 RNA5SP361-201ENST00000362686 118 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 SNORD73B-201ENST00000364394 72 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 MIR188-201ENST00000385034 86 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 AL133482.1-201ENST00000415988 498 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 RPL30P3-201ENST00000424262 333 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 RPL12P12-201ENST00000424633 501 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 AL138785.1-201ENST00000425821 331 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 AL162739.1-201ENST00000450606 307 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 RN7SL552P-201ENST00000462094 276 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 AC124945.1-201ENST00000485133 188 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 RNA5SP473-201ENST00000516402 125 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 RNA5SP434-201ENST00000516647 121 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 AC130365.2-201ENST00000525882 1201 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 AP005403.1-201ENST00000579720 229 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 AC010928.2-201ENST00000588017 287 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 MIR132-201ENST00000591554 101 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 SRRM1P3-201ENST00000426911 2678 ntBASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS9D1Q9Y2B5 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 RNA5SP514-201ENST00000363717 111 ntBASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 RN7SKP128-201ENST00000364270 303 ntBASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 MYL6P5-201ENST00000412707 459 ntBASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 AC009296.1-201ENST00000443146 155 ntBASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 RNU7-197P-201ENST00000458836 62 ntBASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 AC005017.1-201ENST00000482002 490 ntBASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 AP002453.1-201ENST00000492327 668 ntBASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 SUMO2P6-201ENST00000505273 288 ntBASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 RN7SKP49-201ENST00000516675 260 ntBASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 RPSAP75-201ENST00000605848 301 ntBASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 AC015982.1-201ENST00000608113 465 ntBASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
VPS9D1Q9Y2B5 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms