Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AC007823.1-201ENST00000569932 1566 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 ZNF519P1-201ENST00000449011 1626 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 Y_RNA.31-201ENST00000362574 102 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 Y_RNA.112-201ENST00000363250 102 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 MIR298-201ENST00000401212 88 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AL137014.1-201ENST00000420490 1226 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AL161722.2-201ENST00000434731 981 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 CYCSP24-201ENST00000445119 316 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 RPL29P29-201ENST00000448725 423 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 RPS27P27-201ENST00000498779 255 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AC010350.1-201ENST00000504908 231 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 MTCYBP40-201ENST00000509390 1135 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 RN7SKP46-201ENST00000515942 234 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AC093012.1-202ENST00000549403 582 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 MIR5690-201ENST00000583739 73 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AF038458.1-201ENST00000588406 262 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AL138889.2-201ENST00000603883 242 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 AC019193.3-201ENST00000609144 554 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 DUSP12P1-201ENST00000612874 516 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 FAM157A-202ENST00000615155 405 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 OR52H1-202ENST00000641796 1061 ntBASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.22□□□□□ -1.73
CDC42EP3Q9UKI2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.73
CDC42EP3Q9UKI2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CDC42EP3Q9UKI2 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CDC42EP3Q9UKI2 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CDC42EP3Q9UKI2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
CDC42EP3Q9UKI2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.21□□□□□ -1.73
CDC42EP3Q9UKI2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-263P-201ENST00000363811 107 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 RNA5SP428-201ENST00000365129 132 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 RNA5SP219-201ENST00000390940 113 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 SNORA16.2-201ENST00000390991 127 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AC110754.1-201ENST00000399740 601 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 RN7SKP114-201ENST00000410327 279 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 RPL18P10-201ENST00000425606 538 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AC090774.1-201ENST00000435925 246 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 RPL23AP89-201ENST00000439324 255 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 snoU13.1-201ENST00000459157 104 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 DYNLL1P5-201ENST00000467158 270 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AC103987.1-201ENST00000473394 348 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 RN7SL319P-201ENST00000480656 221 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AC106872.2-201ENST00000494303 480 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 SLC25A15P5-201ENST00000508033 253 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AC026801.2-201ENST00000515352 425 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AP006587.4-201ENST00000526053 529 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms