Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC88CQ9P219 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.95□□□□□ -2.1
CCDC88CQ9P219 RNU6-717P-201ENST00000459076 104 ntBASIC1.95□□□□□ -2.1
CCDC88CQ9P219 RPS29P12-201ENST00000460178 152 ntBASIC1.95□□□□□ -2.1
CCDC88CQ9P219 MTCO1P31-201ENST00000506355 492 ntBASIC1.95□□□□□ -2.1
CCDC88CQ9P219 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC88CQ9P219 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC88CQ9P219 AC068339.2-201ENST00000534395 618 ntBASIC1.95□□□□□ -2.1
CCDC88CQ9P219 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC88CQ9P219 AC121758.2-201ENST00000553271 193 ntBASIC1.95□□□□□ -2.1
CCDC88CQ9P219 ISCA1P3-201ENST00000577104 373 ntBASIC1.95□□□□□ -2.1
CCDC88CQ9P219 AL121917.1-203ENST00000605534 577 ntBASIC1.95□□□□□ -2.1
CCDC88CQ9P219 SNHG22-203ENST00000617833 660 ntBASIC1.95□□□□□ -2.1
CCDC88CQ9P219 AP000676.4-201ENST00000624659 623 ntBASIC1.95□□□□□ -2.1
CCDC88CQ9P219 AL590396.2-201ENST00000636511 1041 ntBASIC1.95□□□□□ -2.1
CCDC88CQ9P219 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CCDC88CQ9P219 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.94□□□□□ -2.1
CCDC88CQ9P219 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC88CQ9P219 RNU6-1180P-201ENST00000364935 107 ntBASIC1.94□□□□□ -2.1
CCDC88CQ9P219 SNORA27.3-201ENST00000364937 134 ntBASIC1.94□□□□□ -2.1
CCDC88CQ9P219 RNU6-1151P-201ENST00000384684 107 ntBASIC1.94□□□□□ -2.1
CCDC88CQ9P219 SNORA80E-201ENST00000384744 137 ntBASIC1.94□□□□□ -2.1
CCDC88CQ9P219 RNA5SP213-201ENST00000391031 106 ntBASIC1.94□□□□□ -2.1
CCDC88CQ9P219 FO393413.1-201ENST00000402892 195 ntBASIC1.94□□□□□ -2.1
CCDC88CQ9P219 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC88CQ9P219 HMGB3P12-201ENST00000438745 556 ntBASIC1.94□□□□□ -2.1
CCDC88CQ9P219 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC88CQ9P219 AL591719.1-201ENST00000444669 744 ntBASIC1.94□□□□□ -2.1
CCDC88CQ9P219 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC88CQ9P219 TRBV1-201ENST00000476502 284 ntBASIC1.94□□□□□ -2.1
CCDC88CQ9P219 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.94□□□□□ -2.1
CCDC88CQ9P219 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC88CQ9P219 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.94□□□□□ -2.1
CCDC88CQ9P219 AC126177.3-201ENST00000551839 688 ntBASIC1.94□□□□□ -2.1
CCDC88CQ9P219 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC88CQ9P219 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC88CQ9P219 MIR4504-201ENST00000577413 92 ntBASIC1.94□□□□□ -2.1
CCDC88CQ9P219 AC073569.3-201ENST00000619055 682 ntBASIC1.94□□□□□ -2.1
CCDC88CQ9P219 AC018755.4-201ENST00000619715 454 ntBASIC1.94□□□□□ -2.1
CCDC88CQ9P219 AL118508.4-201ENST00000624142 1176 ntBASIC1.94□□□□□ -2.1
CCDC88CQ9P219 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC88CQ9P219 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC88CQ9P219 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC88CQ9P219 AL359893.1-201ENST00000447628 1580 ntBASIC1.94□□□□□ -2.1
CCDC88CQ9P219 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC88CQ9P219 OR56A5-201ENST00000340110 738 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC88CQ9P219 LINC01347-201ENST00000417964 355 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AC005005.2-201ENST00000420779 380 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 OFD1P18Y-201ENST00000420889 959 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC88CQ9P219 UBBP3-201ENST00000445497 241 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 HMGN3P1-201ENST00000453847 193 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AC233279.1-201ENST00000455300 423 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AC010285.1-201ENST00000470580 392 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 SNORA31.20-201ENST00000517111 133 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AP000790.1-201ENST00000528891 737 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 MYL12BP1-201ENST00000569826 507 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AC004775.1-201ENST00000607389 753 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC88CQ9P219 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
CCDC88CQ9P219 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC88CQ9P219 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC88CQ9P219 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC88CQ9P219 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC88CQ9P219 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.93□□□□□ -2.1
CCDC88CQ9P219 FAM172BP-201ENST00000487497 1089 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AC135721.1-201ENST00000497954 479 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC88CQ9P219 IGLV3-17-201ENST00000519099 244 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
CCDC88CQ9P219 MIR5694-201ENST00000581190 76 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AC068790.3-201ENST00000602988 553 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AC090740.1-201ENST00000623193 2262 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 AC017104.5-201ENST00000637647 639 ntBASIC1.93□□□□□ -2.1
CCDC88CQ9P219 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC88CQ9P219 MTND4P1-201ENST00000457501 1466 ntBASIC1.92□□□□□ -2.1
CCDC88CQ9P219 AC093536.2-201ENST00000565257 1406 ntBASIC1.92□□□□□ -2.1
CCDC88CQ9P219 RNU6-252P-201ENST00000363232 107 ntBASIC1.92□□□□□ -2.1
CCDC88CQ9P219 SNORA51.11-201ENST00000384442 131 ntBASIC1.92□□□□□ -2.1
CCDC88CQ9P219 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.92□□□□□ -2.1
CCDC88CQ9P219 RNU6-272P-201ENST00000411028 104 ntBASIC1.92□□□□□ -2.1
CCDC88CQ9P219 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC88CQ9P219 XKRY2-201ENST00000442362 1093 ntBASIC1.92□□□□□ -2.1
CCDC88CQ9P219 AC105914.1-201ENST00000511798 226 ntBASIC1.92□□□□□ -2.1
CCDC88CQ9P219 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC88CQ9P219 COX6CP3-201ENST00000580869 223 ntBASIC1.92□□□□□ -2.1
CCDC88CQ9P219 RPP40P2-201ENST00000603596 712 ntBASIC1.92□□□□□ -2.1
CCDC88CQ9P219 KATNBL1P5-201ENST00000605015 517 ntBASIC1.92□□□□□ -2.1
CCDC88CQ9P219 AC135178.6-201ENST00000605314 398 ntBASIC1.92□□□□□ -2.1
CCDC88CQ9P219 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC88CQ9P219 YWHAEP7-203ENST00000622054 312 ntBASIC1.92□□□□□ -2.1
CCDC88CQ9P219 AC002064.3-201ENST00000623448 346 ntBASIC1.92□□□□□ -2.1
CCDC88CQ9P219 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms