Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 MED28P6-201ENST00000558776 231 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 OR4K8P-201ENST00000578842 1048 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 PRELID3BP8-201ENST00000604148 295 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AC024560.3-201ENST00000608482 349 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AL591516.1-201ENST00000611326 274 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AC007490.1-201ENST00000624321 703 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AP000526.1-201ENST00000603308 1388 ntBASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AC090740.1-201ENST00000623193 2262 ntBASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AL109741.2-201ENST00000455561 343 ntBASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AC104685.1-201ENST00000502445 371 ntBASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AP003461.1-201ENST00000528866 78 ntBASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 MIR4999-201ENST00000585029 91 ntBASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AL031985.2-201ENST00000600955 480 ntBASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AC011468.4-201ENST00000603942 409 ntBASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AC106028.5-201ENST00000610332 395 ntBASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AC096577.2-201ENST00000611455 153 ntBASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AC103706.2-201ENST00000638080 240 ntBASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 AC073346.2-201ENST00000624724 2058 ntBASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SMC4Q9NTJ3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 AL513185.3-201ENST00000433335 1300 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 OR1S2-201ENST00000302592 978 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 RNA5SP383-201ENST00000362934 120 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 RNU6-97P-201ENST00000363387 104 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 RNU6-744P-201ENST00000365557 107 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 RNU6-1316P-201ENST00000384242 108 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 TAS2R15P-201ENST00000390674 928 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 SSXP9-201ENST00000417503 292 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 AC011233.1-201ENST00000422812 283 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 AL022400.1-201ENST00000423946 935 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 AC108734.1-201ENST00000439549 399 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 RAC1P7-201ENST00000445367 377 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 RN7SL504P-201ENST00000494496 287 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 SNORA3.4-201ENST00000515969 96 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 AP003497.1-201ENST00000528472 562 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 AL390240.1-201ENST00000612950 384 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 AC138932.5-201ENST00000617759 563 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 AC007256.1-201ENST00000392253 2765 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 AC104454.1-201ENST00000421341 1401 ntBASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.03□□□□□ -1.76
SMC4Q9NTJ3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 RNU6-289P-201ENST00000364093 107 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 RNU6-777P-201ENST00000364265 104 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 RNU6-1207P-201ENST00000384343 107 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 AL356421.1-201ENST00000403255 413 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 RPL32P35-201ENST00000415214 394 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 YPEL5P1-201ENST00000419731 367 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 MTATP6P4-201ENST00000427725 675 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 UBE2FP3-201ENST00000436366 524 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 AC006028.1-201ENST00000438379 402 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 MTCYBP3-201ENST00000445588 1137 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 AL606662.1-201ENST00000445763 553 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 AC104308.1-201ENST00000454621 333 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 BX510359.1-201ENST00000456973 237 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 RPL30P9-201ENST00000465586 330 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms