Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 SNRPGP15-201ENST00000600149 222 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AC011468.4-201ENST00000603942 409 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 ATP5A1P2-202ENST00000616464 443 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AC018692.3-201ENST00000623929 123 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 ZNF807-201ENST00000328088 1707 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 CEP170P1-201ENST00000502249 4587 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 RNY4P24-201ENST00000362735 96 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 Y_RNA.318-201ENST00000365131 97 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AL356968.1-201ENST00000416622 474 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 CYCSP46-201ENST00000423569 204 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AL590233.1-201ENST00000430017 456 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AC010153.1-201ENST00000432862 727 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 RPL37P21-201ENST00000435890 276 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 LARP1BP3-201ENST00000437229 869 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 TRIM60P18-201ENST00000441518 828 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 SNRPFP4-201ENST00000456366 242 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 MTCO3P7-201ENST00000510008 774 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AL139174.1-201ENST00000531489 886 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AP000873.5-201ENST00000533906 236 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AC091489.2-201ENST00000566263 604 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AC090615.1-201ENST00000577519 154 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AC073544.2-201ENST00000601155 540 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AP000403.1-201ENST00000603349 851 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 PRELID3BP8-201ENST00000604148 295 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AL033523.1-201ENST00000605153 153 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AC068276.1-201ENST00000605793 379 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AL390208.1-201ENST00000605885 644 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 RN7SKP299-201ENST00000606679 301 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AL596245.1-201ENST00000618994 362 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AC025048.6-202ENST00000627667 438 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AP001148.1-201ENST00000624124 2359 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 MTND4P4-201ENST00000439033 1366 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 AC006378.2-201ENST00000623178 2476 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 FAM35DP-201ENST00000323387 2712 ntBASIC3.85□□□□□ -1.79
DDX4Q9NQI0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX4Q9NQI0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 MIR422A-201ENST00000362286 90 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 RNU5F-6P-201ENST00000362979 116 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 U3.4-201ENST00000363352 213 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 RNU6-777P-201ENST00000364265 104 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 U3.29-201ENST00000391296 212 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 RN7SKP56-201ENST00000410513 331 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 RNU2-15P-201ENST00000410692 191 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 MTCO1P17-201ENST00000411522 491 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AC109780.2-201ENST00000413467 845 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 LSM1P1-201ENST00000438629 273 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 SNRPGP9-201ENST00000456025 225 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 RNA5SP269-201ENST00000459032 137 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 RPL21P104-201ENST00000464143 478 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 RPL31P13-201ENST00000484151 370 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 NIPA2P2-201ENST00000496376 1083 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AC091435.1-201ENST00000505442 584 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AC010424.1-201ENST00000506336 297 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms