Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MRPS33P4-201ENST00000434892 317 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC079804.2-201ENST00000490376 200 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 OSBPL9P3-201ENST00000534523 595 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AMZ2P1-203ENST00000565833 850 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC124283.4-201ENST00000581815 456 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC245036.5-201ENST00000596330 847 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC107905.1-201ENST00000616204 426 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AL356292.1-201ENST00000283110 373 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 RNU6-670P-201ENST00000364312 104 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AL356057.2-201ENST00000403318 432 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 TOMM22P1-201ENST00000418578 312 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC092685.1-201ENST00000447960 1243 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC092470.1-201ENST00000546187 132 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC027104.1-201ENST00000563702 681 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 MTCYBP28-201ENST00000566728 1132 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC092954.1-201ENST00000609121 445 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC009570.1-201ENST00000609599 745 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 MIR203B-201ENST00000636080 86 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 RNU6-1180P-201ENST00000364935 107 ntBASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 AL136372.1-201ENST00000403060 228 ntBASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 RNU2-25P-201ENST00000411041 191 ntBASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 SPA17P1-201ENST00000416656 452 ntBASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 RPL7P12-201ENST00000446719 750 ntBASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 AC233279.1-201ENST00000455300 423 ntBASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 AP000852.1-201ENST00000472460 573 ntBASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 AC008739.2-201ENST00000597006 317 ntBASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 VN1R9P-201ENST00000614184 867 ntBASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.78□□□□□ -2.12
KIAA1549Q9HCM3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 RNU6-1249P-201ENST00000363237 111 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 RNU6-263P-201ENST00000363811 107 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 RNA5SP160-201ENST00000364866 120 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 RNA5SP37-201ENST00000365420 130 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 RNU4-52P-201ENST00000384209 138 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 RNU6-193P-201ENST00000410977 107 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 MORF4L1P6-201ENST00000418771 268 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 AC234781.2-201ENST00000426370 994 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 MTCYBP34-201ENST00000439552 670 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 Z99714.1-201ENST00000450463 807 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 AL031183.1-201ENST00000457667 207 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 SETP11-201ENST00000473027 690 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 AC016065.2-201ENST00000514530 444 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 RNU6-991P-201ENST00000516168 107 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 RNU6-889P-201ENST00000517189 103 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 OR4K7P-201ENST00000580232 945 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 AC113368.1-201ENST00000603736 382 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 AC079610.2-201ENST00000604818 690 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 AC002064.3-201ENST00000623448 346 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 AC068620.4-201ENST00000636730 1182 ntBASIC1.78□□□□□ -2.13
KIAA1549Q9HCM3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 RNA5SP99-201ENST00000364020 114 ntBASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 AC096632.1-201ENST00000427395 310 ntBASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 MTND2P19-201ENST00000449129 1012 ntBASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 RPS29P11-201ENST00000496507 171 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms