Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RNU1-133P-201ENST00000364867 167 ntBASIC1.54□□□□□ -2.16
CHD8Q9HCK8 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.54□□□□□ -2.16
CHD8Q9HCK8 MIR6078-201ENST00000611069 100 ntBASIC1.54□□□□□ -2.16
CHD8Q9HCK8 AC074140.1-201ENST00000621617 208 ntBASIC1.54□□□□□ -2.16
CHD8Q9HCK8 MIR924-201ENST00000638017 53 ntBASIC1.54□□□□□ -2.16
CHD8Q9HCK8 MIR517C-201ENST00000385103 95 ntBASIC1.53□□□□□ -2.16
CHD8Q9HCK8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.53□□□□□ -2.16
CHD8Q9HCK8 AIMP1P2-201ENST00000425294 312 ntBASIC1.53□□□□□ -2.16
CHD8Q9HCK8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.53□□□□□ -2.16
CHD8Q9HCK8 COX6CP14-201ENST00000469580 174 ntBASIC1.53□□□□□ -2.16
CHD8Q9HCK8 GZMAP1-201ENST00000503054 631 ntBASIC1.53□□□□□ -2.16
CHD8Q9HCK8 SNX5P1-201ENST00000505757 1041 ntBASIC1.53□□□□□ -2.16
CHD8Q9HCK8 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.53□□□□□ -2.16
CHD8Q9HCK8 SUB1P4-201ENST00000566062 339 ntBASIC1.53□□□□□ -2.16
CHD8Q9HCK8 AL109653.1-201ENST00000603091 248 ntBASIC1.53□□□□□ -2.16
CHD8Q9HCK8 AP000787.2-201ENST00000604432 568 ntBASIC1.53□□□□□ -2.16
CHD8Q9HCK8 AC013562.2-201ENST00000611632 603 ntBASIC1.53□□□□□ -2.16
CHD8Q9HCK8 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.53□□□□□ -2.16
CHD8Q9HCK8 MIR6733-201ENST00000635723 61 ntBASIC1.53□□□□□ -2.16
CHD8Q9HCK8 LRRC77P-213ENST00000637727 880 ntBASIC1.53□□□□□ -2.16
CHD8Q9HCK8 MTND5P27-201ENST00000428871 1720 ntBASIC1.53□□□□□ -2.16
CHD8Q9HCK8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CHD8Q9HCK8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CHD8Q9HCK8 RNU6-60P-201ENST00000364792 103 ntBASIC1.53□□□□□ -2.16
CHD8Q9HCK8 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.53□□□□□ -2.16
CHD8Q9HCK8 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CHD8Q9HCK8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CHD8Q9HCK8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.53□□□□□ -2.16
CHD8Q9HCK8 AC009812.4-201ENST00000569134 1805 ntBASIC1.53□□□□□ -2.17
CHD8Q9HCK8 Y_RNA.412-201ENST00000384001 104 ntBASIC1.53□□□□□ -2.17
CHD8Q9HCK8 SNORA79B-201ENST00000410557 148 ntBASIC1.53□□□□□ -2.17
CHD8Q9HCK8 MTND2P9-201ENST00000422293 931 ntBASIC1.53□□□□□ -2.17
CHD8Q9HCK8 AL365400.1-201ENST00000431854 640 ntBASIC1.53□□□□□ -2.17
CHD8Q9HCK8 USP9YP15-201ENST00000442391 422 ntBASIC1.53□□□□□ -2.17
CHD8Q9HCK8 VN1R96P-201ENST00000446052 858 ntBASIC1.53□□□□□ -2.17
CHD8Q9HCK8 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.53□□□□□ -2.17
CHD8Q9HCK8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.53□□□□□ -2.17
CHD8Q9HCK8 GSTA11P-201ENST00000452866 669 ntBASIC1.53□□□□□ -2.17
CHD8Q9HCK8 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.53□□□□□ -2.17
CHD8Q9HCK8 AC109464.2-201ENST00000510242 943 ntBASIC1.53□□□□□ -2.17
CHD8Q9HCK8 RNU11-2P-201ENST00000516898 142 ntBASIC1.53□□□□□ -2.17
CHD8Q9HCK8 IMMP1LP2-201ENST00000552954 492 ntBASIC1.53□□□□□ -2.17
CHD8Q9HCK8 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.53□□□□□ -2.17
CHD8Q9HCK8 AC084373.1-201ENST00000603311 235 ntBASIC1.53□□□□□ -2.17
CHD8Q9HCK8 AC012150.2-201ENST00000621300 544 ntBASIC1.53□□□□□ -2.17
CHD8Q9HCK8 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.52□□□□□ -2.17
CHD8Q9HCK8 AC110491.1-201ENST00000562191 2010 ntBASIC1.52□□□□□ -2.17
CHD8Q9HCK8 RNU4-13P-201ENST00000364019 141 ntBASIC1.52□□□□□ -2.17
CHD8Q9HCK8 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.52□□□□□ -2.17
CHD8Q9HCK8 NDUFB4P5-201ENST00000415445 361 ntBASIC1.52□□□□□ -2.17
CHD8Q9HCK8 USP9YP27-201ENST00000418455 438 ntBASIC1.52□□□□□ -2.17
CHD8Q9HCK8 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.52□□□□□ -2.17
CHD8Q9HCK8 AC069234.5-201ENST00000611056 416 ntBASIC1.52□□□□□ -2.17
CHD8Q9HCK8 RNA5SP354-201ENST00000391247 136 ntBASIC1.52□□□□□ -2.17
CHD8Q9HCK8 SAR1AP2-201ENST00000392696 594 ntBASIC1.52□□□□□ -2.17
CHD8Q9HCK8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
CHD8Q9HCK8 AC002524.1-201ENST00000411687 547 ntBASIC1.52□□□□□ -2.17
CHD8Q9HCK8 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
CHD8Q9HCK8 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.52□□□□□ -2.17
CHD8Q9HCK8 AC008885.2-201ENST00000509506 930 ntBASIC1.52□□□□□ -2.17
CHD8Q9HCK8 AC021146.7-201ENST00000509604 775 ntBASIC1.52□□□□□ -2.17
CHD8Q9HCK8 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.52□□□□□ -2.17
CHD8Q9HCK8 ZNF209P-201ENST00000593450 2304 ntBASIC1.51□□□□□ -2.17
CHD8Q9HCK8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
CHD8Q9HCK8 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
CHD8Q9HCK8 AL030996.1-201ENST00000411430 235 ntBASIC1.51□□□□□ -2.17
CHD8Q9HCK8 AL591212.2-201ENST00000433923 257 ntBASIC1.51□□□□□ -2.17
CHD8Q9HCK8 RPL21P18-201ENST00000469899 480 ntBASIC1.51□□□□□ -2.17
CHD8Q9HCK8 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CHD8Q9HCK8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.51□□□□□ -2.17
CHD8Q9HCK8 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.51□□□□□ -2.17
CHD8Q9HCK8 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.51□□□□□ -2.17
CHD8Q9HCK8 AGGF1P8-201ENST00000562979 1000 ntBASIC1.51□□□□□ -2.17
CHD8Q9HCK8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.51□□□□□ -2.17
CHD8Q9HCK8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
CHD8Q9HCK8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.51□□□□□ -2.17
CHD8Q9HCK8 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.51□□□□□ -2.17
CHD8Q9HCK8 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC1.51□□□□□ -2.17
CHD8Q9HCK8 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
CHD8Q9HCK8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
CHD8Q9HCK8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.5□□□□□ -2.17
CHD8Q9HCK8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
CHD8Q9HCK8 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CHD8Q9HCK8 RNU4-91P-201ENST00000364778 135 ntBASIC1.5□□□□□ -2.17
CHD8Q9HCK8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.5□□□□□ -2.17
CHD8Q9HCK8 snoU13.3-201ENST00000459441 104 ntBASIC1.5□□□□□ -2.17
CHD8Q9HCK8 RNU6-405P-201ENST00000516637 110 ntBASIC1.5□□□□□ -2.17
CHD8Q9HCK8 RNU6-467P-201ENST00000517027 110 ntBASIC1.5□□□□□ -2.17
CHD8Q9HCK8 DUXAP11-201ENST00000603858 526 ntBASIC1.5□□□□□ -2.17
CHD8Q9HCK8 VIS1.1-201ENST00000610517 203 ntBASIC1.5□□□□□ -2.17
CHD8Q9HCK8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
CHD8Q9HCK8 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CHD8Q9HCK8 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
CHD8Q9HCK8 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.5□□□□□ -2.17
CHD8Q9HCK8 HMGB1P45-201ENST00000435986 653 ntBASIC1.5□□□□□ -2.17
CHD8Q9HCK8 XKRY2-201ENST00000442362 1093 ntBASIC1.5□□□□□ -2.17
CHD8Q9HCK8 AL590664.1-201ENST00000448065 339 ntBASIC1.5□□□□□ -2.17
CHD8Q9HCK8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.5□□□□□ -2.17
CHD8Q9HCK8 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.5□□□□□ -2.17
CHD8Q9HCK8 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms