Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC005832.2-201ENST00000538921 1430 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AL672296.1-201ENST00000427780 2158 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 Y_RNA.77-201ENST00000362962 107 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 RNU5E-5P-201ENST00000365379 116 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 SNORD116-9-201ENST00000384000 95 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 SNORD116-3-201ENST00000384287 95 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 SNORD116-7-201ENST00000384404 95 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 SNORD116-5-201ENST00000384462 95 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 MIR184-201ENST00000384962 84 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 HLFP1-201ENST00000402375 499 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 RPS3AP24-201ENST00000407896 734 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 MIR1302-8-201ENST00000408342 128 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 RNA5SP129-201ENST00000410276 118 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 CYCSP46-201ENST00000423569 204 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 OR4K11P-201ENST00000431829 904 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC083863.1-201ENST00000438811 231 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC118469.1-201ENST00000442943 488 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 COX6CP12-201ENST00000446748 202 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC114967.1-201ENST00000504890 259 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC022695.1-201ENST00000522089 237 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC006960.3-201ENST00000561845 705 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC011471.1-201ENST00000585766 187 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC012065.4-201ENST00000602445 679 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC068790.3-201ENST00000602988 553 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC011468.4-201ENST00000603942 409 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC004908.2-201ENST00000609090 574 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 OR10AB1P-201ENST00000609613 938 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC243312.2-201ENST00000623340 601 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AC025048.6-202ENST00000627667 438 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 AL138713.1-201ENST00000624026 2130 ntBASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 DEFB108F-201ENST00000344638 222 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 Y_RNA.46-201ENST00000362695 102 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 RNA5SP51-201ENST00000364750 119 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 RNU6-533P-201ENST00000384144 107 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 MIR199A2-201ENST00000385289 110 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 AL391417.1-201ENST00000404100 426 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 RNU4-65P-201ENST00000410473 140 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 ATP5A1P2-201ENST00000412323 255 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 AL158156.1-201ENST00000422509 473 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 MTATP6P4-201ENST00000427725 675 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 AC024082.2-201ENST00000434771 238 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 Z74696.2-201ENST00000436514 498 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 CYCSP32-201ENST00000440548 321 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 RPL21P23-201ENST00000446654 460 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 SNORD105B-201ENST00000458770 79 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 RNA5SP269-201ENST00000459032 137 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 AC078785.3-201ENST00000476607 425 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 GMPSP1-201ENST00000514075 579 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 FABP5P5-201ENST00000515537 406 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 DEFB108D-201ENST00000527787 222 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 AP001330.4-201ENST00000604350 154 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 AC093838.1-201ENST00000613014 469 ntBASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
POLR1BQ9H9Y6 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 DDX10P1-201ENST00000448545 1933 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 RIOK3P1-201ENST00000418778 1528 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 Y_RNA.111-201ENST00000363248 100 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 SNORD116-1-201ENST00000384335 95 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms