Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC011451.2-201ENST00000604303 598 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AC106900.2-201ENST00000604994 317 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AL451086.1-201ENST00000605596 223 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AC072039.2-201ENST00000608883 439 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AC131902.3-201ENST00000611767 581 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AP000676.3-201ENST00000623299 569 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AC092192.1-201ENST00000633154 1018 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AL672167.1-206ENST00000356293 943 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 RNU4-35P-201ENST00000362588 141 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 Y_RNA.302-201ENST00000364997 102 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 RNU2-43P-201ENST00000410306 190 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 RPL7P2-201ENST00000427639 268 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 MTND5P25-201ENST00000430499 799 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AC024082.2-201ENST00000434771 238 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 RPL36AP6-201ENST00000435770 321 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AC091862.1-201ENST00000438016 1100 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AC122718.1-201ENST00000439448 744 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AP000542.1-201ENST00000448473 371 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 ATG12P2-201ENST00000456830 416 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 RNU7-125P-201ENST00000458760 62 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AC025518.1-201ENST00000479856 347 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 RN7SKP18-201ENST00000516005 275 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 RNU6-826P-201ENST00000516827 104 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AC026407.1-201ENST00000518369 204 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 MED28P6-201ENST00000558776 231 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AC010653.1-201ENST00000571108 881 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 ISCA1P3-201ENST00000577104 373 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AC021171.1-201ENST00000603137 706 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AP000811.1-201ENST00000603803 651 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AL158211.4-201ENST00000606988 584 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AC107214.2-201ENST00000608204 634 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AC106028.5-201ENST00000610332 395 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AL359198.2-201ENST00000611836 194 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AC008443.7-201ENST00000622195 246 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AC120349.3-201ENST00000624377 529 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AL392088.2-201ENST00000637607 285 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 MTCO1P9-201ENST00000505577 1534 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 AC002546.1-201ENST00000588041 2504 ntBASIC3.13□□□□□ -1.91
VIPAS39Q9H9C1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 API5P2-201ENST00000397055 1498 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 OR1S2-201ENST00000302592 978 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 RNU6-173P-201ENST00000364215 104 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 RNU6-114P-201ENST00000384704 105 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 RPS3AP24-201ENST00000407896 734 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 MTCO1P17-201ENST00000411522 491 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 HMGB1P11-201ENST00000413899 637 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AL035423.1-201ENST00000420331 213 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AC234781.2-201ENST00000426370 994 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AL445669.1-201ENST00000426743 755 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 HIGD1AP11-201ENST00000438361 280 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AC104308.1-201ENST00000454621 333 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 RPL21P10-201ENST00000463521 490 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AC004263.1-201ENST00000479327 332 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AC098862.1-201ENST00000504991 413 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AC093809.1-201ENST00000509155 340 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 RNU6-1129P-201ENST00000515964 104 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 ELOCP31-201ENST00000540463 467 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AC136618.2-201ENST00000575091 400 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 MIR544B-201ENST00000582372 78 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 BDH2P1-201ENST00000602288 736 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AP001429.1-201ENST00000602568 530 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AC090115.4-201ENST00000609970 188 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms