Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AL627309.6-201ENST00000606857 840 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 PART1_2.1-201ENST00000612397 250 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 AL355810.1-201ENST00000614629 552 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 AL138880.2-201ENST00000616214 239 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 AC002064.3-201ENST00000623448 346 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 OR1S1-201ENST00000624470 978 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AC109315.1-201ENST00000584143 1347 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AL139413.1-201ENST00000421309 217 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 ARL5AP4-201ENST00000430731 512 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 MTCO1P53-201ENST00000441633 699 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 RPL23AP20-201ENST00000447965 421 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AL590664.1-201ENST00000448065 339 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AC114781.4-201ENST00000513707 639 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 RN7SKP31-201ENST00000516354 278 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AC021451.1-201ENST00000523498 1129 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AC015688.2-201ENST00000584523 262 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 BNIP3P24-201ENST00000593398 557 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 VN1R83P-201ENST00000595685 445 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AC019159.1-201ENST00000605094 187 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 RPL23AP88-201ENST00000605759 454 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AC097504.2-201ENST00000608088 454 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AC024257.5-201ENST00000612739 531 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AC023158.2-201ENST00000614876 543 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 AL359693.1-201ENST00000614959 2407 ntBASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
RPAP3Q9H6T3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 SNRPEP3-201ENST00000338402 276 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 RNU6-1074P-201ENST00000383995 104 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 SNORA1.3-201ENST00000384676 136 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 MRPS36P1-201ENST00000421291 307 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AL354692.1-201ENST00000423044 315 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 RPL23AP22-201ENST00000437556 453 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 UBBP3-201ENST00000445497 241 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AL358794.1-201ENST00000445689 381 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 MTND2P19-201ENST00000449129 1012 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AC005297.2-201ENST00000450430 606 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 USP9YP34-201ENST00000453983 808 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 RFC5P1-201ENST00000454419 874 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 OR6K1P-201ENST00000456766 971 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 snoU109.4-201ENST00000458953 143 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AC108734.3-201ENST00000481241 1165 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AC113347.3-201ENST00000509113 148 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 RNU6-1225P-201ENST00000516336 65 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 OR10V3P-201ENST00000525712 725 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AC125611.2-201ENST00000551907 647 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AP001330.4-201ENST00000604350 154 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 NUTF2P8-201ENST00000604593 363 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AL133507.1-201ENST00000605269 557 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AC055876.5-201ENST00000605667 259 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AC104763.3-201ENST00000613765 618 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AC120349.2-201ENST00000625002 298 ntBASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.24□□□□□ -1.89
RPAP3Q9H6T3 AC008264.2-201ENST00000610193 3731 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 AC004972.1-201ENST00000623934 2209 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 RNU6-859P-201ENST00000362728 107 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 RNU6-216P-201ENST00000363282 104 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 SNORD51-201ENST00000384320 80 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 MIR9-1-201ENST00000385198 89 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 RPS4XP3-201ENST00000398541 413 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 RPL19P1-201ENST00000411635 428 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 RAP1BP1-201ENST00000412709 553 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 MTND4LP10-201ENST00000435146 291 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 AC092427.1-201ENST00000439177 601 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms