Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AP003733.2-201ENST00000529409 171 ntBASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 AL133271.1-201ENST00000538229 291 ntBASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 RN7SL708P-201ENST00000580952 299 ntBASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 AC108751.5-201ENST00000492880 1336 ntBASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 RNU6-545P-201ENST00000362681 104 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 RN7SKP95-201ENST00000362860 303 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 RNU6-393P-201ENST00000384475 107 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 RNA5SP107-201ENST00000411358 122 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 MYL8P-204ENST00000431574 518 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 AL133445.1-201ENST00000467051 452 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 UBA52P7-201ENST00000486088 380 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 RPL23AP55-201ENST00000498163 452 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 RNU2-69P-201ENST00000516061 100 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 RNU6-1212P-201ENST00000517023 104 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 RNU6-897P-201ENST00000517135 105 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 AC007991.1-201ENST00000522680 631 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 AC007225.2-201ENST00000562529 256 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 MIR4293-201ENST00000584305 78 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 AL138889.2-201ENST00000603883 242 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 AC000068.2-201ENST00000608816 460 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 AL590099.1-201ENST00000615276 138 ntBASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NUCKS1Q9H1E3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 AC114947.2-201ENST00000565748 2125 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 RNU1-74P-201ENST00000384108 171 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 RNU6-398P-201ENST00000384143 109 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 Y_RNA.577-201ENST00000384794 101 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 SNORA68.2-201ENST00000391263 128 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 RNU6-1156P-201ENST00000410365 100 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 AC104333.2-201ENST00000422630 192 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 RPL7P2-201ENST00000427639 268 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 AC009238.2-201ENST00000431026 355 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 CFL1P1-202ENST00000432948 411 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 AC004383.1-201ENST00000438135 289 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 AC005094.1-201ENST00000440420 368 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 AC098831.1-201ENST00000440661 216 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 NDUFB1P2-201ENST00000449477 176 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 AC013470.1-201ENST00000453438 462 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 RPL36AP13-201ENST00000457490 317 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 LINC01399-202ENST00000458450 244 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 FTH1P2-201ENST00000466086 412 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 RPL17P19-201ENST00000489069 552 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 AC024940.3-201ENST00000538551 316 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 AC109446.1-201ENST00000566172 220 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 AC006600.1-201ENST00000572529 153 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 AC006557.5-201ENST00000603126 811 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 BX005214.3-202ENST00000619809 325 ntBASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms