Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RNU6-1309P-201ENST00000363305 108 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 RNU6-1188P-201ENST00000363795 107 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 Y_RNA.212-201ENST00000364177 102 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 RNU6-574P-201ENST00000384265 107 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 MIR192-201ENST00000384915 110 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 U3.29-201ENST00000391296 212 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 RNU2-36P-201ENST00000410361 191 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 RPL31P2-201ENST00000413849 377 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AC099336.2-201ENST00000422457 254 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 RPS17P8-201ENST00000434525 335 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 FABP5P14-201ENST00000437273 393 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AC105402.2-201ENST00000438503 358 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AC099560.2-201ENST00000457554 255 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AC006967.1-201ENST00000467608 589 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 ST13P14-201ENST00000474095 734 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 RN7SL41P-201ENST00000476144 297 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 RN7SL319P-201ENST00000480656 221 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 CEACAMP10-202ENST00000495431 496 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 TRBVA-201ENST00000498804 316 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AC098591.2-201ENST00000510152 315 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 RN7SKP24-201ENST00000515888 284 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 RNU6-798P-201ENST00000516912 103 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AC090136.1-201ENST00000520009 240 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 MIR4790-201ENST00000577799 79 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AC025588.3-201ENST00000604182 274 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AP000654.2-201ENST00000605633 586 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AC091979.2-201ENST00000607514 214 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AC025034.2-201ENST00000623264 286 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AL136313.1-201ENST00000624804 202 ntBASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
FOXP3Q9BZS1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
FOXP3Q9BZS1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
FOXP3Q9BZS1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
FOXP3Q9BZS1 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 SNORD115-7-201ENST00000365306 82 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 RNU5E-6P-201ENST00000365574 115 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 UBE2V1P2-201ENST00000397758 440 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 AL591848.1-201ENST00000413092 322 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 AC245028.1-201ENST00000423259 256 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 RPL23AP38-201ENST00000423801 469 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 AC108059.2-201ENST00000434626 151 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 AF228730.2-201ENST00000438784 848 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 AC010733.1-201ENST00000451515 401 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 Y_RNA.653-201ENST00000459091 95 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 RPL5P30-201ENST00000465511 891 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 RPL7P43-201ENST00000478876 753 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 MTCYBP40-201ENST00000509390 1135 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 PTP4A1P4-201ENST00000512479 322 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 RNA5SP454-201ENST00000517231 127 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 FAM60DP-201ENST00000524174 632 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 AP000763.2-201ENST00000540641 163 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 AC110743.1-201ENST00000584870 478 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 AL670379.11-201ENST00000604059 253 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 AL670379.10-201ENST00000604330 253 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 AL670379.12-201ENST00000605291 253 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 AL670379.9-201ENST00000605428 253 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 AC022893.3-201ENST00000607665 437 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 AL713922.2-201ENST00000619384 716 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 RMST_9.1-201ENST00000619945 193 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 MTND5P10-201ENST00000603719 1809 ntBASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
FOXP3Q9BZS1 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 AL451142.2-201ENST00000429076 2090 ntBASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 RPL32P3-201ENST00000359025 275 ntBASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 RNU6-61P-201ENST00000365528 109 ntBASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 AC117470.1-201ENST00000381974 330 ntBASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 RNA5SP146-201ENST00000410743 123 ntBASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 AL590139.1-201ENST00000416267 400 ntBASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 AL139396.1-201ENST00000421137 167 ntBASIC4.89□□□□□ -1.63
FOXP3Q9BZS1 Z74021.1-201ENST00000423610 407 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms