Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 SNORD35A-201ENST00000363389 86 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 SNORD32A-201ENST00000364805 84 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 Y_RNA.337-201ENST00000365312 102 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 RNU6-1310P-201ENST00000384153 107 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 Y_RNA.563-201ENST00000384707 108 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 MIR433-201ENST00000384837 93 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 OR3A2-201ENST00000408891 1076 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 RN7SKP91-201ENST00000410852 288 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 RPL18AP14-201ENST00000417685 526 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 AC000089.1-201ENST00000424559 801 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 FDPSP6-201ENST00000425091 512 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 ATP5LP4-201ENST00000434169 307 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 AC112220.1-201ENST00000434628 355 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 GPM6BP3-201ENST00000442797 145 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 EEF1B2P7-201ENST00000451177 676 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 AC022730.1-201ENST00000473114 568 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 RPL23AP40-201ENST00000487630 390 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 RN7SL591P-201ENST00000496150 292 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 RNU6-966P-201ENST00000516479 104 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 MIR5571-201ENST00000577998 113 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 AC053481.4-201ENST00000583164 216 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 AC027229.1-201ENST00000583887 253 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 AC069294.1-201ENST00000608397 350 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 AC109309.2-201ENST00000612597 332 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 uc_338.26-201ENST00000612659 160 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 AC127024.6-201ENST00000621598 424 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 SNORA43.4-201ENST00000629559 138 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 MIR4679-1-201ENST00000637619 75 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 AC008568.2-201ENST00000623862 2313 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC3.21□□□□□ -1.9
KRTAP3-1Q9BYR8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 FANCD2P2-201ENST00000437591 1400 ntBASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 AC087516.1-201ENST00000561236 2428 ntBASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 Y_RNA.101-201ENST00000363154 102 ntBASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 Y_RNA.172-201ENST00000363765 102 ntBASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 RNU6-270P-201ENST00000364131 105 ntBASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 RNA5SP140-201ENST00000364524 92 ntBASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 RNA5-8SP5-201ENST00000365304 152 ntBASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 U3.52-201ENST00000384034 216 ntBASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 Y_RNA.498-201ENST00000384460 102 ntBASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 MIR487A-201ENST00000385009 80 ntBASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 SNORD37.2-201ENST00000391075 66 ntBASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 RNY4P18-201ENST00000391107 89 ntBASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 RNA5SP35-201ENST00000391257 129 ntBASIC3.2□□□□□ -1.9
KRTAP3-1Q9BYR8 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms