Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AL358934.1-201ENST00000432346 324 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 ARPC3P5-201ENST00000448802 534 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AC132479.1-201ENST00000449160 144 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 MTCO2P30-201ENST00000503662 364 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 LRRC34P2-201ENST00000514850 553 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 MIR2114-201ENST00000516645 80 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 SNORA67.7-201ENST00000516664 135 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AC123904.3-201ENST00000547218 814 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 HSPE1P3-201ENST00000559254 309 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 MIR4637-201ENST00000582405 84 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AC006130.2-201ENST00000586202 326 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 CKS1BP3-201ENST00000600888 237 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AC009233.1-201ENST00000616477 371 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 FER-210ENST00000628534 558 ntTSL 5 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AC110994.2-201ENST00000635481 492 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 OR11H5P-202ENST00000641612 1325 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 RNU6-984P-201ENST00000363236 109 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 Y_RNA.279-201ENST00000364763 95 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 RNU6-809P-201ENST00000384461 107 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 SNRPEP2-201ENST00000397592 279 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 RN7SKP159-201ENST00000410657 292 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 RN7SKP53-201ENST00000411337 315 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AMD1P2-201ENST00000412936 992 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 NUP35P2-201ENST00000416748 943 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 FCF1P1-201ENST00000432690 571 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AC002486.1-201ENST00000435098 391 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 RPL23AP20-201ENST00000447965 421 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AL118496.2-201ENST00000448300 230 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AC079448.1-201ENST00000449377 373 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 Z82190.1-201ENST00000454534 490 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 MTCO3P20-201ENST00000454926 688 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AC017015.1-201ENST00000477387 286 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AC007182.2-201ENST00000489251 402 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AC018710.1-201ENST00000506509 158 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AC114786.4-201ENST00000508771 728 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AC025465.4-201ENST00000513422 638 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 OR8L1P-201ENST00000534005 955 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 CBX3P5-201ENST00000552017 521 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AL359212.1-201ENST00000556608 614 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 SULT1C2P1-202ENST00000562418 459 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 MIR5186-201ENST00000577504 120 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AC115621.1-201ENST00000604653 858 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AL445264.1-201ENST00000621719 171 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AL357559.1-201ENST00000622228 274 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 AC112204.3-201ENST00000623822 332 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.41□□□□□ -1.7
SALL3Q9BXA9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SALL3Q9BXA9 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SALL3Q9BXA9 AC134882.1-201ENST00000603738 1676 ntBASIC4.4□□□□□ -1.7
SALL3Q9BXA9 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
SALL3Q9BXA9 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms