Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 Z74021.1-201ENST00000423610 407 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 MTATP6P16-201ENST00000434543 526 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 AC024082.2-201ENST00000434771 238 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 MTCYBP6-201ENST00000441810 138 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 RPL23AP33-201ENST00000442301 452 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 MTND4P19-201ENST00000446659 478 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 AC116533.1-201ENST00000459748 321 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 RN7SL303P-201ENST00000469773 251 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 AC004062.1-201ENST00000509926 645 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 RNU4-29P-201ENST00000515943 174 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 RNU7-51P-201ENST00000516560 62 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 NARSP2-201ENST00000518524 679 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 AP005639.2-201ENST00000527592 928 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 AC128657.1-201ENST00000549459 145 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 PSMA3P-201ENST00000555485 635 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 AL121821.2-201ENST00000556081 394 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 RNU6-89P-201ENST00000606519 100 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 AC130324.3-201ENST00000614165 542 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 HSPE1P11-201ENST00000339579 310 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AC067945.1-201ENST00000342609 618 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 RNU6-263P-201ENST00000363811 107 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 RNU4-20P-201ENST00000365601 151 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 Y_RNA.474-201ENST00000384341 102 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 MIR153-1-201ENST00000384914 90 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 RNA5SP146-201ENST00000410743 123 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AC092447.6-201ENST00000414578 210 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 RPS29P17-201ENST00000430795 166 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 ERLEC1P1-201ENST00000433806 578 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 NDUFA5P4-201ENST00000436704 385 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AC010655.1-201ENST00000449336 292 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AC006480.1-201ENST00000449887 378 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AC234775.1-201ENST00000454247 670 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 RNU6-329P-201ENST00000459618 107 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 RN7SL98P-201ENST00000462271 300 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 RN7SKP219-201ENST00000516825 296 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AC103783.1-201ENST00000520506 373 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 MIR4458-201ENST00000578872 75 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AL031666.3-201ENST00000609320 1006 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AC068831.8-201ENST00000620171 435 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AC091905.2-201ENST00000623143 306 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AC011944.2-201ENST00000624440 683 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 AL592437.2-201ENST00000421655 2434 ntBASIC4.23□□□□□ -1.73
NDC1Q9BTX1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
NDC1Q9BTX1 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 OR51H2P-202ENST00000641424 3046 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 RNU6-511P-201ENST00000363496 107 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 RNA5SP479-201ENST00000364858 117 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 RNU6-637P-201ENST00000384050 107 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 MIR514A2-201ENST00000385131 88 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 MIR514A3-201ENST00000385132 88 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 MIR3065-201ENST00000390137 79 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 RNU4-78P-201ENST00000410940 126 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 RNU6-193P-201ENST00000410977 107 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms