Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MIR1275-201ENST00000408770 80 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 AC079809.1-201ENST00000415468 276 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 CYCSP6-201ENST00000434498 302 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.59□□□□□ -1.51
USB1Q9BQ65 RN7SL714P-201ENST00000487050 298 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 RN7SL170P-201ENST00000487098 295 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.59□□□□□ -1.51
USB1Q9BQ65 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.59□□□□□ -1.51
USB1Q9BQ65 RNU6-941P-201ENST00000516346 108 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 RN7SKP234-201ENST00000517173 224 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 AP005660.1-201ENST00000522972 293 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 AC084121.1-201ENST00000533882 835 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 MIR4716-201ENST00000579628 84 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 MIR4512-201ENST00000583257 77 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.59□□□□□ -1.51
USB1Q9BQ65 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.59□□□□□ -1.51
USB1Q9BQ65 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 AC084757.4-201ENST00000616350 526 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 MIR6721-201ENST00000617181 87 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.59□□□□□ -1.51
USB1Q9BQ65 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.59□□□□□ -1.51
USB1Q9BQ65 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USB1Q9BQ65 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
USB1Q9BQ65 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USB1Q9BQ65 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
USB1Q9BQ65 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
USB1Q9BQ65 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.59□□□□□ -1.52
USB1Q9BQ65 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USB1Q9BQ65 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USB1Q9BQ65 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USB1Q9BQ65 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
USB1Q9BQ65 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USB1Q9BQ65 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USB1Q9BQ65 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USB1Q9BQ65 AC105235.1-201ENST00000623208 1816 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USB1Q9BQ65 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 RNU6-17P-201ENST00000384245 107 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 RNU6-18P-201ENST00000384527 107 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 SNORA46.1-201ENST00000391069 153 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 Y_RNA.586-201ENST00000391146 98 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 BTF3L4P2-201ENST00000392798 346 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 SNORD12B-201ENST00000410433 91 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 HMGN1P20-201ENST00000411849 300 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 AC119751.6-201ENST00000416712 186 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 AP000907.1-201ENST00000428428 510 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 AC108479.1-201ENST00000431142 427 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 AC009296.1-201ENST00000443146 155 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 COX4I1P2-201ENST00000447446 547 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 HSPE1P6-201ENST00000479457 291 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 RNU5F-8P-201ENST00000515941 111 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 RPL21P9-201ENST00000556149 474 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 AC022968.1-201ENST00000567372 442 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 AC067852.4-201ENST00000590314 478 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 AC008749.1-201ENST00000597650 306 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 RPL7P50-201ENST00000600588 727 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 RPL23AP88-201ENST00000605759 454 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USB1Q9BQ65 U73479.1-201ENST00000618062 168 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 AC018445.2-201ENST00000622987 260 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 AC099506.2-201ENST00000623074 221 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USB1Q9BQ65 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USB1Q9BQ65 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
USB1Q9BQ65 AC135776.4-201ENST00000624300 1904 ntBASIC5.58□□□□□ -1.52
USB1Q9BQ65 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USB1Q9BQ65 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USB1Q9BQ65 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
USB1Q9BQ65 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USB1Q9BQ65 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USB1Q9BQ65 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
USB1Q9BQ65 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USB1Q9BQ65 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
USB1Q9BQ65 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.57□□□□□ -1.52
USB1Q9BQ65 STAG3L4-201ENST00000352103 530 ntBASIC5.57□□□□□ -1.52
USB1Q9BQ65 Y_RNA.262-201ENST00000364641 102 ntBASIC5.57□□□□□ -1.52
USB1Q9BQ65 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.57□□□□□ -1.52
USB1Q9BQ65 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.57□□□□□ -1.52
USB1Q9BQ65 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.57□□□□□ -1.52
USB1Q9BQ65 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.57□□□□□ -1.52
USB1Q9BQ65 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.57□□□□□ -1.52
USB1Q9BQ65 SNX18P26-201ENST00000458433 740 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms