Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RN7SL271P-201ENST00000487601 295 ntBASIC4.19□□□□□ -1.74
SMOQ99835 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.19□□□□□ -1.74
SMOQ99835 TMEM248P1-201ENST00000510579 951 ntBASIC4.19□□□□□ -1.74
SMOQ99835 AC025465.4-201ENST00000513422 638 ntBASIC4.19□□□□□ -1.74
SMOQ99835 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.19□□□□□ -1.74
SMOQ99835 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.19□□□□□ -1.74
SMOQ99835 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.19□□□□□ -1.74
SMOQ99835 AF235103.2-201ENST00000525753 346 ntBASIC4.19□□□□□ -1.74
SMOQ99835 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.19□□□□□ -1.74
SMOQ99835 OR8L1P-201ENST00000534005 955 ntBASIC4.19□□□□□ -1.74
SMOQ99835 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
SMOQ99835 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.19□□□□□ -1.74
SMOQ99835 HIF1AP1-201ENST00000553642 175 ntBASIC4.19□□□□□ -1.74
SMOQ99835 AC098848.2-201ENST00000588023 330 ntBASIC4.19□□□□□ -1.74
SMOQ99835 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.19□□□□□ -1.74
SMOQ99835 AL020997.2-201ENST00000602607 184 ntBASIC4.19□□□□□ -1.74
SMOQ99835 AL355812.1-201ENST00000603215 216 ntBASIC4.19□□□□□ -1.74
SMOQ99835 RMST_3.1-201ENST00000611651 109 ntBASIC4.19□□□□□ -1.74
SMOQ99835 Y_RNA.804-201ENST00000615262 101 ntBASIC4.19□□□□□ -1.74
SMOQ99835 AC063943.3-201ENST00000615562 356 ntBASIC4.19□□□□□ -1.74
SMOQ99835 AC104260.1-201ENST00000616660 539 ntBASIC4.19□□□□□ -1.74
SMOQ99835 AC005609.4-201ENST00000625071 447 ntBASIC4.19□□□□□ -1.74
SMOQ99835 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.19□□□□□ -1.74
SMOQ99835 MIR6715B-201ENST00000637172 77 ntBASIC4.19□□□□□ -1.74
SMOQ99835 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMOQ99835 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SMOQ99835 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SMOQ99835 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SMOQ99835 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMOQ99835 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SMOQ99835 AC016588.2-201ENST00000632484 3021 ntBASIC4.19□□□□□ -1.74
SMOQ99835 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SMOQ99835 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMOQ99835 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SMOQ99835 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.18□□□□□ -1.74
SMOQ99835 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SMOQ99835 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.18□□□□□ -1.74
SMOQ99835 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMOQ99835 RNU6-1078P-201ENST00000364522 103 ntBASIC4.18□□□□□ -1.74
SMOQ99835 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SMOQ99835 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.18□□□□□ -1.74
SMOQ99835 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.18□□□□□ -1.74
SMOQ99835 AL391219.1-201ENST00000422570 483 ntBASIC4.18□□□□□ -1.74
SMOQ99835 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.18□□□□□ -1.74
SMOQ99835 OR4K11P-201ENST00000431829 904 ntBASIC4.18□□□□□ -1.74
SMOQ99835 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.18□□□□□ -1.74
SMOQ99835 ELOCP18-201ENST00000434209 337 ntBASIC4.18□□□□□ -1.74
SMOQ99835 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMOQ99835 RPS29P7-201ENST00000439662 171 ntBASIC4.18□□□□□ -1.74
SMOQ99835 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.18□□□□□ -1.74
SMOQ99835 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.18□□□□□ -1.74
SMOQ99835 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.18□□□□□ -1.74
SMOQ99835 AC022364.2-201ENST00000457963 554 ntBASIC4.18□□□□□ -1.74
SMOQ99835 AC091951.2-201ENST00000500762 203 ntBASIC4.18□□□□□ -1.74
SMOQ99835 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.18□□□□□ -1.74
SMOQ99835 AC018710.1-201ENST00000506509 158 ntBASIC4.18□□□□□ -1.74
SMOQ99835 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.18□□□□□ -1.74
SMOQ99835 SNORA40.12-201ENST00000516329 111 ntBASIC4.18□□□□□ -1.74
SMOQ99835 AP003385.6-201ENST00000531603 374 ntBASIC4.18□□□□□ -1.74
SMOQ99835 AP000857.1-201ENST00000532151 543 ntBASIC4.18□□□□□ -1.74
SMOQ99835 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.18□□□□□ -1.74
SMOQ99835 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.18□□□□□ -1.74
SMOQ99835 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.18□□□□□ -1.74
SMOQ99835 CBX3P5-201ENST00000552017 521 ntBASIC4.18□□□□□ -1.74
SMOQ99835 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.18□□□□□ -1.74
SMOQ99835 AL133153.1-201ENST00000557756 303 ntBASIC4.18□□□□□ -1.74
SMOQ99835 GLUD1P4-201ENST00000590914 418 ntBASIC4.18□□□□□ -1.74
SMOQ99835 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.18□□□□□ -1.74
SMOQ99835 AC022140.2-201ENST00000623500 188 ntBASIC4.18□□□□□ -1.74
SMOQ99835 AC067931.1-201ENST00000624190 671 ntBASIC4.18□□□□□ -1.74
SMOQ99835 AC024614.3-201ENST00000637860 256 ntBASIC4.18□□□□□ -1.74
SMOQ99835 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.18□□□□□ -1.74
SMOQ99835 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.18□□□□□ -1.74
SMOQ99835 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SMOQ99835 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.18□□□□□ -1.74
SMOQ99835 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.18□□□□□ -1.74
SMOQ99835 AC027287.1-201ENST00000553115 1453 ntBASIC4.18□□□□□ -1.74
SMOQ99835 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SMOQ99835 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMOQ99835 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.17□□□□□ -1.74
SMOQ99835 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMOQ99835 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SMOQ99835 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMOQ99835 PNPT1P2-201ENST00000456768 2050 ntBASIC4.17□□□□□ -1.74
SMOQ99835 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.17□□□□□ -1.74
SMOQ99835 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMOQ99835 RNU6-694P-201ENST00000364071 147 ntBASIC4.17□□□□□ -1.74
SMOQ99835 SNORA69-201ENST00000383895 132 ntBASIC4.17□□□□□ -1.74
SMOQ99835 MIR153-1-201ENST00000384914 90 ntBASIC4.17□□□□□ -1.74
SMOQ99835 MIR1250-201ENST00000408098 113 ntBASIC4.17□□□□□ -1.74
SMOQ99835 SNORA3C-201ENST00000408792 125 ntBASIC4.17□□□□□ -1.74
SMOQ99835 RNU4-78P-201ENST00000410940 126 ntBASIC4.17□□□□□ -1.74
SMOQ99835 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.17□□□□□ -1.74
SMOQ99835 OR1AA1P-201ENST00000419597 916 ntBASIC4.17□□□□□ -1.74
SMOQ99835 EIF4EP1-201ENST00000422311 642 ntBASIC4.17□□□□□ -1.74
SMOQ99835 RWDD4P2-201ENST00000426392 563 ntBASIC4.17□□□□□ -1.74
SMOQ99835 AC083863.1-201ENST00000438811 231 ntBASIC4.17□□□□□ -1.74
SMOQ99835 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.17□□□□□ -1.74
SMOQ99835 AC016691.1-201ENST00000441321 413 ntBASIC4.17□□□□□ -1.74
SMOQ99835 RPL23AP33-201ENST00000442301 452 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms