Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPAS1Q99742 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.72□□□□□ -1.81
NPAS1Q99742 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
NPAS1Q99742 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPAS1Q99742 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPAS1Q99742 SNORA51.2-201ENST00000364595 132 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 RNA5SP189-201ENST00000364920 115 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 MTCO3P40-201ENST00000392516 676 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 AL590002.1-201ENST00000406554 418 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.72□□□□□ -1.81
NPAS1Q99742 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.72□□□□□ -1.81
NPAS1Q99742 AL356095.1-201ENST00000417217 199 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 MTCO3P30-201ENST00000426425 670 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.72□□□□□ -1.81
NPAS1Q99742 RPL7L1P10-201ENST00000427790 463 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 MTCO2P11-201ENST00000431069 680 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 GPR143P-201ENST00000434155 205 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.72□□□□□ -1.81
NPAS1Q99742 RPL23AP46-201ENST00000438548 490 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.72□□□□□ -1.81
NPAS1Q99742 AL662791.1-201ENST00000441992 928 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 RPS4XP4-201ENST00000443195 763 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.72□□□□□ -1.81
NPAS1Q99742 AC132479.1-201ENST00000449160 144 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 AC093899.1-201ENST00000457984 376 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.72□□□□□ -1.81
NPAS1Q99742 AP000873.1-201ENST00000463987 400 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 AC103987.1-201ENST00000473394 348 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 AC004924.1-201ENST00000480160 781 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 RN7SL604P-201ENST00000492589 296 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.72□□□□□ -1.81
NPAS1Q99742 RPL23AP55-201ENST00000498163 452 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.72□□□□□ -1.81
NPAS1Q99742 RNU6-1220P-201ENST00000517126 108 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 MTND4LP26-201ENST00000518144 282 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.72□□□□□ -1.81
NPAS1Q99742 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.72□□□□□ -1.81
NPAS1Q99742 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.72□□□□□ -1.81
NPAS1Q99742 AP004242.1-201ENST00000533701 349 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPAS1Q99742 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
NPAS1Q99742 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.72□□□□□ -1.81
NPAS1Q99742 OR4H12P-201ENST00000556269 907 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 PARP1P2-201ENST00000556806 195 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 MIR4697-201ENST00000582977 78 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.72□□□□□ -1.81
NPAS1Q99742 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.72□□□□□ -1.81
NPAS1Q99742 AP003465.2-201ENST00000602571 373 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 AC012443.1-201ENST00000605605 231 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 AC008536.2-201ENST00000607284 349 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.72□□□□□ -1.81
NPAS1Q99742 AC024941.1-201ENST00000612250 334 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 AC244100.1-202ENST00000621554 382 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 AL353748.2-201ENST00000622148 471 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.72□□□□□ -1.81
NPAS1Q99742 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.72□□□□□ -1.81
NPAS1Q99742 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
NPAS1Q99742 TAB3P1-202ENST00000452645 1634 ntBASIC3.72□□□□□ -1.81
NPAS1Q99742 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.72□□□□□ -1.81
NPAS1Q99742 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.72□□□□□ -1.81
NPAS1Q99742 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPAS1Q99742 RLIMP1-201ENST00000339626 1680 ntBASIC3.71□□□□□ -1.81
NPAS1Q99742 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
NPAS1Q99742 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
NPAS1Q99742 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.71□□□□□ -1.81
NPAS1Q99742 EXOC5P1-201ENST00000510543 1969 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPAS1Q99742 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPAS1Q99742 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NPAS1Q99742 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPAS1Q99742 RNU5A-1-201ENST00000362698 116 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 RNU4-12P-201ENST00000365233 139 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 RNU6-169P-201ENST00000365336 107 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPAS1Q99742 Y_RNA.409-201ENST00000383990 98 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 RNU6-76P-201ENST00000384060 104 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 RNU1-13P-201ENST00000384499 162 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 SNORA70C-201ENST00000384538 135 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 MIR548F1-201ENST00000408667 84 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 EIF1P1-201ENST00000421436 341 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 PPP1R11P2-201ENST00000423543 382 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 DUTP6-201ENST00000425573 462 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.71□□□□□ -1.82
NPAS1Q99742 AC008850.1-201ENST00000427546 362 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 AC004975.1-201ENST00000428733 208 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.71□□□□□ -1.82
NPAS1Q99742 MTND3P21-201ENST00000433774 331 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 AC005094.1-201ENST00000440420 368 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 MTCO3P45-201ENST00000443036 613 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 RPS24P6-201ENST00000452670 400 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.71□□□□□ -1.82
NPAS1Q99742 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.71□□□□□ -1.82
NPAS1Q99742 VN1R105P-201ENST00000486595 910 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 HMGB1P22-201ENST00000505315 124 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 AC002456.2-201ENST00000509356 380 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 AF213884.2-201ENST00000510417 903 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 AC005921.1-201ENST00000510589 286 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.71□□□□□ -1.82
NPAS1Q99742 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms