Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC093303.1-201ENST00000514549 295 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 Y_RNA.665-201ENST00000516177 98 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 RNU6-273P-201ENST00000516937 96 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 RNU6-201P-201ENST00000517100 61 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 SNORA25.17-201ENST00000517184 124 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AC110743.1-201ENST00000584870 478 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AC073539.2-201ENST00000597113 165 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AP000654.2-201ENST00000605633 586 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 FAM27D1-201ENST00000612308 341 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AC123768.4-201ENST00000616244 701 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AP000843.1-201ENST00000624880 701 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 MIR6715B-201ENST00000637172 77 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AC068254.2-201ENST00000623938 3577 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AC092435.4-201ENST00000623012 4159 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.69
CDK5RAP1Q96SZ6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 Y_RNA.255-201ENST00000364581 97 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 RNY4P16-201ENST00000364768 94 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AC068538.1-201ENST00000376856 336 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 OR52E6-202ENST00000379946 954 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU6-730P-201ENST00000383954 104 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU6-1222P-201ENST00000384615 107 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU6-1151P-201ENST00000384684 107 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU2-6P-201ENST00000411404 190 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AL353777.1-201ENST00000425552 326 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AC234779.1-201ENST00000425910 285 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL23AP52-201ENST00000439311 478 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AL731563.1-201ENST00000442202 214 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AC002381.1-201ENST00000447049 280 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AL136380.1-201ENST00000447970 162 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL23AP81-201ENST00000455252 467 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AC007547.1-201ENST00000462177 490 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL7P22-201ENST00000466005 733 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL23AP12-201ENST00000467573 473 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL31P50-201ENST00000471002 296 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 RN7SL41P-201ENST00000476144 297 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL38P4-201ENST00000502376 214 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 KLHL2P1-201ENST00000508691 521 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 SCARNA24.1-201ENST00000516465 137 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU6-714P-201ENST00000516963 103 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 APOOP3-201ENST00000536787 586 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL21P7-201ENST00000557463 483 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AC008269.2-201ENST00000561915 1105 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 HMGB1P6-201ENST00000569046 646 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 MIR3939-201ENST00000582614 106 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 SNORD39.3-201ENST00000584451 71 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AC008687.2-201ENST00000597865 520 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AC245389.1-201ENST00000605141 529 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU6-89P-201ENST00000606519 100 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 OR10AB1P-201ENST00000609613 938 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 AC023043.4-201ENST00000612081 449 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 uc_338.15-201ENST00000615470 191 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 USP9YP4-201ENST00000424401 1745 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 ELL2P4-201ENST00000446870 1376 ntBASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP1Q96SZ6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms