Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RAB3IPQ96QF0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RAB3IPQ96QF0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.31□□□□□ -1.88
RAB3IPQ96QF0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.31□□□□□ -1.88
RAB3IPQ96QF0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AC104454.1-201ENST00000421341 1401 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 MIR372-201ENST00000362225 67 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 SNORA46-201ENST00000384762 135 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 TXNP7-201ENST00000406296 293 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 RN7SKP159-201ENST00000410657 292 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AC245054.2-201ENST00000415639 319 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AC093151.1-201ENST00000427711 313 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AL117339.2-201ENST00000430475 180 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AL008629.1-201ENST00000438615 184 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 RPL7P36-201ENST00000444633 681 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 MTCYBP3-201ENST00000445588 1137 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AL606662.1-201ENST00000445763 553 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AP1S2P1-201ENST00000457344 379 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AL135752.1-201ENST00000479477 471 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 LARP1BP2-201ENST00000486594 519 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AC010265.1-201ENST00000513509 211 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 RNU6-390P-201ENST00000516259 103 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 MTATP6P15-201ENST00000527233 835 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AC007224.1-201ENST00000564410 144 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AC005951.1-201ENST00000576706 485 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 MIR4697-201ENST00000582977 78 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 GLUD1P4-201ENST00000590914 418 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AC091965.4-201ENST00000607691 587 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AC093838.1-201ENST00000613014 469 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AC010133.1-201ENST00000615809 842 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 MIR6500-201ENST00000622700 86 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AP000676.3-201ENST00000623299 569 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 RNA5SP196-201ENST00000625967 102 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 MAPK10-322ENST00000641485 4530 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 MAPK10-362ENST00000641864 4484 ntBASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RAB3IPQ96QF0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 FAM35BP-202ENST00000497389 3337 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 RNU1-64P-201ENST00000365443 163 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AC110754.1-201ENST00000399740 601 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 SNORA3.3-201ENST00000408712 125 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 RNA5SP344-201ENST00000411081 104 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 RN7SKP140-201ENST00000411196 284 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 HMGN1P24-201ENST00000412282 298 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 SPA17P1-201ENST00000416656 452 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AC091390.3-201ENST00000426478 338 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AC004975.1-201ENST00000428733 208 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AC007919.1-201ENST00000429380 217 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AC091390.1-201ENST00000433904 331 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 CST9LP2-201ENST00000437612 320 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 RPL21P89-201ENST00000444021 467 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 GAPDHP27-201ENST00000447427 1020 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 RPS4XP15-201ENST00000489210 795 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 RN7SKP21-201ENST00000516503 220 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AC120057.2-201ENST00000571520 271 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 MTATP6P24-201ENST00000576835 677 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 ISCA1P3-201ENST00000577104 373 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AC013476.2-201ENST00000614456 459 ntBASIC3.29□□□□□ -1.88
RAB3IPQ96QF0 AC012150.2-201ENST00000621300 544 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms