Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
COL21A1Q96P44 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.57□□□□□ -2
COL21A1Q96P44 RNA5SP126-201ENST00000365092 109 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 RNU6-657P-201ENST00000383904 107 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 SNORD65.1-201ENST00000390889 71 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.57□□□□□ -2
COL21A1Q96P44 MCTS2P-201ENST00000394552 546 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 RNA5SP38-201ENST00000410750 119 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 RNA5SP492-201ENST00000411330 114 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 AC019070.1-201ENST00000415008 1024 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 USP9YP21-201ENST00000420603 432 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 AC019178.2-201ENST00000423595 505 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.57□□□□□ -2
COL21A1Q96P44 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.57□□□□□ -2
COL21A1Q96P44 AC087499.2-201ENST00000432861 149 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.57□□□□□ -2
COL21A1Q96P44 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.57□□□□□ -2
COL21A1Q96P44 AC026410.2-201ENST00000460281 156 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 AC096576.1-201ENST00000489014 359 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.57□□□□□ -2
COL21A1Q96P44 AC097462.2-201ENST00000504623 481 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.57□□□□□ -2
COL21A1Q96P44 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.57□□□□□ -2
COL21A1Q96P44 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.57□□□□□ -2
COL21A1Q96P44 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.57□□□□□ -2
COL21A1Q96P44 CR383656.7-201ENST00000548164 174 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.57□□□□□ -2
COL21A1Q96P44 AL022099.1-201ENST00000604551 712 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 AC106900.2-201ENST00000604994 317 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.57□□□□□ -2
COL21A1Q96P44 AC091046.2-201ENST00000620775 665 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 CR381653.2-201ENST00000624041 768 ntBASIC2.57□□□□□ -2
COL21A1Q96P44 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.57□□□□□ -2
COL21A1Q96P44 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
COL21A1Q96P44 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 RNU6-1257P-201ENST00000384625 110 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
COL21A1Q96P44 AL139095.1-201ENST00000404326 391 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 AL096701.2-201ENST00000416920 238 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 AL513175.2-201ENST00000422071 443 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 AC234781.2-201ENST00000426370 994 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.56□□□□□ -2
COL21A1Q96P44 MTND2P5-201ENST00000432656 1006 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 GTF2IP7-202ENST00000436677 309 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.56□□□□□ -2
COL21A1Q96P44 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.56□□□□□ -2
COL21A1Q96P44 OFD1P3Y-201ENST00000453312 783 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 AC092902.1-201ENST00000486999 259 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 VN1R104P-201ENST00000505115 1009 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 TBCAP3-201ENST00000512475 312 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 AC025881.1-201ENST00000518851 512 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.56□□□□□ -2
COL21A1Q96P44 OR5AK1P-201ENST00000524837 922 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.56□□□□□ -2
COL21A1Q96P44 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.56□□□□□ -2
COL21A1Q96P44 DNAJC8P1-201ENST00000554535 372 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.56□□□□□ -2
COL21A1Q96P44 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.56□□□□□ -2
COL21A1Q96P44 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
COL21A1Q96P44 CYCSP39-201ENST00000565821 309 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 MIR4637-201ENST00000582405 84 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.56□□□□□ -2
COL21A1Q96P44 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.56□□□□□ -2
COL21A1Q96P44 AL356575.1-201ENST00000603008 283 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 AC097504.2-201ENST00000608088 454 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 TUG1_1.1-201ENST00000610654 145 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 RNU6-1192P-201ENST00000612197 107 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 RNU6-489P-201ENST00000618289 107 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 AC011330.2-201ENST00000621680 635 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 AC004009.2-201ENST00000623016 728 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.56□□□□□ -2
COL21A1Q96P44 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.56□□□□□ -2
COL21A1Q96P44 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.56□□□□□ -2
COL21A1Q96P44 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.56□□□□□ -2
COL21A1Q96P44 CRYM-AS1-204ENST00000637983 556 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 AP002907.1-201ENST00000606361 1430 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.56□□□□□ -2
COL21A1Q96P44 AC091564.4-201ENST00000533934 2194 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 AC008568.2-201ENST00000623862 2313 ntBASIC2.56□□□□□ -2
COL21A1Q96P44 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.55□□□□□ -2
COL21A1Q96P44 VTRNA1-1-201ENST00000363120 99 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 RNA5SP139-201ENST00000364340 117 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.55□□□□□ -2
COL21A1Q96P44 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.55□□□□□ -2
COL21A1Q96P44 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.55□□□□□ -2
COL21A1Q96P44 AL138827.1-201ENST00000402666 306 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 AL356131.1-201ENST00000405826 414 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.55□□□□□ -2
COL21A1Q96P44 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.55□□□□□ -2
COL21A1Q96P44 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.55□□□□□ -2
COL21A1Q96P44 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.55□□□□□ -2
COL21A1Q96P44 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
COL21A1Q96P44 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.55□□□□□ -2
COL21A1Q96P44 RPL39P6-201ENST00000448289 150 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
COL21A1Q96P44 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms