Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 CEACAMP10-202ENST00000495431 496 ntBASIC3.41□□□□□ -1.86
CMTM3Q96MX0 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.41□□□□□ -1.86
CMTM3Q96MX0 TTC39CP1-201ENST00000512513 755 ntBASIC3.41□□□□□ -1.86
CMTM3Q96MX0 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.41□□□□□ -1.86
CMTM3Q96MX0 Y_RNA.672-201ENST00000516289 104 ntBASIC3.41□□□□□ -1.86
CMTM3Q96MX0 RN7SKP60-201ENST00000516985 239 ntBASIC3.41□□□□□ -1.86
CMTM3Q96MX0 RN7SKP92-201ENST00000517266 244 ntBASIC3.41□□□□□ -1.86
CMTM3Q96MX0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.41□□□□□ -1.86
CMTM3Q96MX0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.41□□□□□ -1.86
CMTM3Q96MX0 MIR4425-201ENST00000580572 84 ntBASIC3.41□□□□□ -1.86
CMTM3Q96MX0 AC073544.2-201ENST00000601155 540 ntBASIC3.41□□□□□ -1.86
CMTM3Q96MX0 AL606490.9-201ENST00000603331 271 ntBASIC3.41□□□□□ -1.86
CMTM3Q96MX0 MIR6780A-201ENST00000615089 68 ntBASIC3.41□□□□□ -1.86
CMTM3Q96MX0 AC006338.1-201ENST00000618453 749 ntBASIC3.41□□□□□ -1.86
CMTM3Q96MX0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.41□□□□□ -1.86
CMTM3Q96MX0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CMTM3Q96MX0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CMTM3Q96MX0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CMTM3Q96MX0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CMTM3Q96MX0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CMTM3Q96MX0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CMTM3Q96MX0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CMTM3Q96MX0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 SAR1AP2-201ENST00000392696 594 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 RNU2-8P-201ENST00000410727 190 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 RPS15AP12-201ENST00000419498 388 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 USP9YP36-201ENST00000424581 829 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AC091390.3-201ENST00000426478 338 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 RPL30P14-201ENST00000482744 348 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AC041039.1-201ENST00000485656 536 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AF213884.1-201ENST00000488102 463 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AC010587.1-201ENST00000505809 469 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AC099522.1-202ENST00000514718 367 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 SNORD59.2-201ENST00000516873 68 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AC128657.1-201ENST00000549459 145 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AP005136.1-201ENST00000579765 429 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AP000860.1-201ENST00000605250 559 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AC019193.2-201ENST00000610012 634 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AC008250.2-201ENST00000615261 205 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 TPTE2P4-201ENST00000258589 1605 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 AL158163.1-201ENST00000603915 1649 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 SRP72P2-201ENST00000344851 1979 ntBASIC3.4□□□□□ -1.87
CMTM3Q96MX0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CMTM3Q96MX0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC007785.2-201ENST00000598627 1916 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 RNU6-1077P-201ENST00000410506 102 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC016769.2-201ENST00000414815 475 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 Z85995.1-201ENST00000415547 335 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AL138878.2-201ENST00000440581 1241 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 MTATP6P30-201ENST00000443540 664 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 RPS29P31-201ENST00000446147 164 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 RPL38P1-201ENST00000460914 211 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC084357.1-201ENST00000473404 255 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 HMGN2P13-201ENST00000476476 274 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 RPL32P34-201ENST00000486380 400 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 MTND4LP22-201ENST00000508209 276 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 PHBP14-201ENST00000512887 367 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 RNU6-1282P-201ENST00000516735 96 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms