Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.42□□□□□ -1.86
TM9SF4Q92544 AL137849.1-201ENST00000604767 169 ntBASIC3.42□□□□□ -1.86
TM9SF4Q92544 NDUFA8P1-201ENST00000605525 367 ntBASIC3.42□□□□□ -1.86
TM9SF4Q92544 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.42□□□□□ -1.86
TM9SF4Q92544 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.42□□□□□ -1.86
TM9SF4Q92544 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.42□□□□□ -1.86
TM9SF4Q92544 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.42□□□□□ -1.86
TM9SF4Q92544 AC018755.4-201ENST00000619715 454 ntBASIC3.42□□□□□ -1.86
TM9SF4Q92544 AC004009.2-201ENST00000623016 728 ntBASIC3.42□□□□□ -1.86
TM9SF4Q92544 AC032011.1-201ENST00000611703 1549 ntBASIC3.42□□□□□ -1.86
TM9SF4Q92544 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TM9SF4Q92544 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TM9SF4Q92544 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
TM9SF4Q92544 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
TM9SF4Q92544 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.42□□□□□ -1.86
TM9SF4Q92544 AL359893.1-201ENST00000447628 1580 ntBASIC3.42□□□□□ -1.86
TM9SF4Q92544 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TM9SF4Q92544 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TM9SF4Q92544 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TM9SF4Q92544 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.41□□□□□ -1.86
TM9SF4Q92544 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
TM9SF4Q92544 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
TM9SF4Q92544 RNU6-744P-201ENST00000365557 107 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 RNU6-533P-201ENST00000384144 107 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 RNU6-1316P-201ENST00000384242 108 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 SNORA40.3-201ENST00000390964 122 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 MIR1305-201ENST00000408300 86 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 RNU6-648P-201ENST00000410190 107 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.41□□□□□ -1.86
TM9SF4Q92544 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.41□□□□□ -1.86
TM9SF4Q92544 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.41□□□□□ -1.86
TM9SF4Q92544 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.41□□□□□ -1.86
TM9SF4Q92544 RPS3AP44-201ENST00000425466 790 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 PSMA6P3-201ENST00000428242 164 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 AP000907.1-201ENST00000428428 510 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 CYCSP4-201ENST00000429682 331 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 AL590233.1-201ENST00000430017 456 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 AL159987.2-201ENST00000432754 307 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 AC091862.1-201ENST00000438016 1100 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.41□□□□□ -1.86
TM9SF4Q92544 RPL7P36-201ENST00000444633 681 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 RPL29P29-201ENST00000448725 423 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 AC010655.1-201ENST00000449336 292 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 USP9YP12-201ENST00000450481 570 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 AL590365.1-201ENST00000450788 243 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 Z82190.1-201ENST00000454534 490 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 SNORD42A-201ENST00000459584 64 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 RPL23AP62-201ENST00000463396 453 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 AC004801.2-202ENST00000463559 283 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 KLF3P2-201ENST00000465138 268 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TM9SF4Q92544 FAM172BP-201ENST00000487497 1089 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 TMEM248P1-201ENST00000510579 951 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.41□□□□□ -1.86
TM9SF4Q92544 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.41□□□□□ -1.86
TM9SF4Q92544 IGKV2D-36-201ENST00000518643 226 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 MTND4LP18-201ENST00000526864 291 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 AP003392.2-201ENST00000527269 208 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 AC024224.1-201ENST00000538284 609 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 ZNF519P3-201ENST00000557158 1032 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.41□□□□□ -1.86
TM9SF4Q92544 MIR3913-1-201ENST00000577744 102 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.41□□□□□ -1.86
TM9SF4Q92544 AC107304.1-201ENST00000604229 296 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 AC080013.4-201ENST00000607624 649 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 AC108747.1-201ENST00000609508 535 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 AL592295.2-201ENST00000612578 206 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 RNVU1-4-201ENST00000612985 164 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.41□□□□□ -1.86
TM9SF4Q92544 AC099654.13-201ENST00000639774 207 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 AP000553.6-201ENST00000641242 118 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TM9SF4Q92544 AC010733.2-201ENST00000589496 5702 ntBASIC3.41□□□□□ -1.86
TM9SF4Q92544 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
TM9SF4Q92544 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
TM9SF4Q92544 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TM9SF4Q92544 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
TM9SF4Q92544 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
TM9SF4Q92544 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
TM9SF4Q92544 RNU6-517P-201ENST00000384362 110 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 Y_RNA.548-201ENST00000384656 105 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 MIR184-201ENST00000384962 84 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 U3.19-201ENST00000390893 196 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
TM9SF4Q92544 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 RPL31P2-201ENST00000413849 377 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 AL158156.1-201ENST00000422509 473 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 OR51AB1P-201ENST00000429046 620 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 ARF4P2-201ENST00000430209 526 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 MTND1P4-201ENST00000435196 415 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 HSPE1P28-201ENST00000443139 211 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC244505.5-201ENST00000443639 207 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 NANOGNBP1-201ENST00000448444 480 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms