Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 RN7SL481P-201ENST00000477764 299 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 RPS26P15-201ENST00000488067 348 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 TMEM248P1-201ENST00000510579 951 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 SNORD116-26-201ENST00000516006 96 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 Y_RNA.675-201ENST00000516389 149 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 Y_RNA.701-201ENST00000516812 110 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AC105029.1-201ENST00000520250 669 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 SUMO2P20-201ENST00000520803 283 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AC107953.1-201ENST00000522216 297 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AP005435.4-201ENST00000529514 284 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AC243972.3-201ENST00000539655 198 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AL133153.1-201ENST00000557756 303 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AC011477.5-201ENST00000586571 259 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AP001029.3-201ENST00000588063 596 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AC010680.3-201ENST00000604215 520 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 MIR7641-1-201ENST00000627518 61 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 RNU4-20P-201ENST00000365601 151 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 MIR514A2-201ENST00000385131 88 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 MIR514A3-201ENST00000385132 88 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 MIR454-201ENST00000390180 115 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 MIR1911-201ENST00000410783 80 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 RNU2-62P-201ENST00000410868 191 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC018630.2-202ENST00000422992 927 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 RPL12P46-201ENST00000436610 195 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 HLA-N-201ENST00000437516 135 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 MRPL50P4-201ENST00000446432 475 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AL118496.2-201ENST00000448300 230 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 RPS17P13-201ENST00000448974 407 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 HMGB3P21-201ENST00000452483 547 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC108059.3-201ENST00000456388 214 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC006512.1-201ENST00000468816 291 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 RN7SKP82-201ENST00000516786 223 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AP001781.1-201ENST00000530977 207 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AP000857.1-201ENST00000532151 543 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC078814.3-201ENST00000553036 491 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 MIR4284-201ENST00000578924 81 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC067852.4-201ENST00000590314 478 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC010591.1-201ENST00000603941 649 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AL050343.2-201ENST00000607338 280 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AL031666.3-201ENST00000609320 1006 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC105429.2-201ENST00000610567 517 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC009248.2-201ENST00000619826 254 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC019278.1-201ENST00000623516 479 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 AC004972.1-201ENST00000623934 2209 ntBASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.79□□□□□ -1.8
PNLDC1Q8NA58 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 ASNSP3-201ENST00000451989 1306 ntBASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 AL139276.1-201ENST00000311910 1001 ntBASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 NACAP2-201ENST00000318548 624 ntBASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 MIR129-1-201ENST00000384972 72 ntBASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 AL122016.1-201ENST00000403365 367 ntBASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 AC016397.1-201ENST00000412463 242 ntBASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 FAR2P2-201ENST00000413041 594 ntBASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.78□□□□□ -1.8
PNLDC1Q8NA58 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms