Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRAM1L1Q8N609 SNORD62.1-201ENST00000362541 86 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 SNORD21-201ENST00000383953 95 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 RNU6-207P-201ENST00000384137 107 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 MIR506-201ENST00000384998 124 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 AL139039.1-201ENST00000401900 692 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.58□□□□□ -2
TRAM1L1Q8N609 AL513477.1-202ENST00000417061 214 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 AL356320.2-201ENST00000417263 507 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 UBE2D3P3-201ENST00000426992 425 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.58□□□□□ -2
TRAM1L1Q8N609 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.58□□□□□ -2
TRAM1L1Q8N609 AC234775.1-201ENST00000454247 670 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 RPL30P5-201ENST00000494923 336 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 MTCO2P9-201ENST00000503214 694 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 AC098799.1-201ENST00000504752 800 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.58□□□□□ -2
TRAM1L1Q8N609 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.58□□□□□ -2
TRAM1L1Q8N609 RPPH1-2P-201ENST00000516688 293 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 AC026241.1-201ENST00000517873 2142 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 AC023632.1-201ENST00000518463 375 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.58□□□□□ -2
TRAM1L1Q8N609 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.58□□□□□ -2
TRAM1L1Q8N609 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.58□□□□□ -2
TRAM1L1Q8N609 MIR3162-201ENST00000581818 82 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 AC015688.2-201ENST00000584523 262 ntBASIC2.58□□□□□ -2
TRAM1L1Q8N609 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.58□□□□□ -2
TRAM1L1Q8N609 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
TRAM1L1Q8N609 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
TRAM1L1Q8N609 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRAM1L1Q8N609 RNU6-1197P-201ENST00000391183 107 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.57□□□□□ -2
TRAM1L1Q8N609 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRAM1L1Q8N609 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.57□□□□□ -2
TRAM1L1Q8N609 USP9YP20-201ENST00000419224 558 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 BEND7P1-201ENST00000422058 457 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.57□□□□□ -2
TRAM1L1Q8N609 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.57□□□□□ -2
TRAM1L1Q8N609 AC024082.2-201ENST00000434771 238 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 MUPP-201ENST00000438111 566 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 AC092393.1-201ENST00000439625 742 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 AL096829.2-201ENST00000446582 742 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 SUMO2P2-201ENST00000456482 255 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 COX7A2P2-201ENST00000505291 250 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRAM1L1Q8N609 AL359273.1-201ENST00000510918 627 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.57□□□□□ -2
TRAM1L1Q8N609 CASP1P1-201ENST00000526345 212 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.57□□□□□ -2
TRAM1L1Q8N609 AC243972.3-201ENST00000539655 198 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.57□□□□□ -2
TRAM1L1Q8N609 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.57□□□□□ -2
TRAM1L1Q8N609 AC105224.1-201ENST00000587055 421 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 AC006023.1-201ENST00000603944 259 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 AL031176.1-201ENST00000604554 466 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 AP005229.2-201ENST00000609980 697 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.57□□□□□ -2
TRAM1L1Q8N609 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.57□□□□□ -2
TRAM1L1Q8N609 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRAM1L1Q8N609 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
TRAM1L1Q8N609 TPTE2P4-201ENST00000258589 1605 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 ZNF519P1-201ENST00000449011 1626 ntBASIC2.57□□□□□ -2
TRAM1L1Q8N609 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRAM1L1Q8N609 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.56□□□□□ -2
TRAM1L1Q8N609 AC008669.1-201ENST00000565823 2178 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRAM1L1Q8N609 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
TRAM1L1Q8N609 MIR135A2-201ENST00000384854 100 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 MIR592-201ENST00000384959 97 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 RNU2-43P-201ENST00000410306 190 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 AL512637.2-201ENST00000431287 1256 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.56□□□□□ -2
TRAM1L1Q8N609 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.56□□□□□ -2
TRAM1L1Q8N609 RPL23AP74-201ENST00000437246 471 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.56□□□□□ -2
TRAM1L1Q8N609 VN1R10P-201ENST00000447106 875 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 COX6CP18-201ENST00000448769 222 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.56□□□□□ -2
TRAM1L1Q8N609 AP000852.1-201ENST00000472460 573 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 AC126182.1-201ENST00000478134 357 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.56□□□□□ -2
TRAM1L1Q8N609 RAC1P5-201ENST00000512182 576 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 SNORA31.15-201ENST00000516771 132 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.56□□□□□ -2
TRAM1L1Q8N609 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.56□□□□□ -2
TRAM1L1Q8N609 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.56□□□□□ -2
TRAM1L1Q8N609 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.56□□□□□ -2
TRAM1L1Q8N609 AL390838.2-201ENST00000602394 274 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 AP000787.2-201ENST00000604432 568 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 AL161734.1-201ENST00000609720 557 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 AC103798.2-201ENST00000624292 632 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 AC110079.1-202ENST00000635213 138 ntBASIC2.56□□□□□ -2
TRAM1L1Q8N609 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRAM1L1Q8N609 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.56□□□□□ -2
TRAM1L1Q8N609 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
TRAM1L1Q8N609 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TRAM1L1Q8N609 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.55□□□□□ -2
TRAM1L1Q8N609 Y_RNA.111-201ENST00000363248 100 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms