Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 RNU6-1317P-201ENST00000364582 104 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 Y_RNA.483-201ENST00000384380 101 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 Y_RNA.533-201ENST00000384596 114 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 RNU6-700P-201ENST00000391043 107 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 RN7SKP206-201ENST00000410823 293 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 GNG5P5-201ENST00000420444 220 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 BX323845.3-201ENST00000428215 527 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 RPSAP65-201ENST00000429660 595 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 RPS24P6-201ENST00000452670 400 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 FABP5P15-201ENST00000453566 214 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 RPL39P38-201ENST00000467018 153 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 RN7SL57P-201ENST00000493687 290 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 AC090517.1-201ENST00000569307 266 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 AC008507.3-201ENST00000585753 472 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 AC105254.2-201ENST00000603636 436 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 MIR8076-201ENST00000611401 83 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 AC130454.1-201ENST00000622948 401 ntBASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.4□□□□□ -1.54
DEPDC4Q8N2C3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.4□□□□□ -1.55
DEPDC4Q8N2C3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
DEPDC4Q8N2C3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
DEPDC4Q8N2C3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
DEPDC4Q8N2C3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.4□□□□□ -1.55
DEPDC4Q8N2C3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
DEPDC4Q8N2C3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.55
DEPDC4Q8N2C3 MTND5P9-201ENST00000503854 1755 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 Y_RNA.19-201ENST00000362462 99 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 RNU1-134P-201ENST00000362935 165 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 RNY3P11-201ENST00000364153 102 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-384P-201ENST00000364900 104 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-611P-201ENST00000384276 104 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 Y_RNA.515-201ENST00000384535 112 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 HMGB1P20-201ENST00000402555 677 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 U3.42-201ENST00000408746 214 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 SNORD56-201ENST00000413522 71 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 AC004938.1-201ENST00000438468 308 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 AL663074.2-201ENST00000440621 479 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 ATP5LP2-201ENST00000440646 311 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 RNU1-88P-201ENST00000459274 128 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 RPL30P10-201ENST00000488148 337 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 AL049874.1-201ENST00000489560 388 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 MLLT10P2-201ENST00000506434 249 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 FTH1P9-201ENST00000513251 355 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 RN7SKP40-201ENST00000517211 242 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 AC034114.1-201ENST00000520293 285 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 FKBP1BP1-201ENST00000553366 325 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 MIR3128-201ENST00000581957 66 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 MIR4443-201ENST00000585052 53 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 AC009314.1-201ENST00000603871 304 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 AC092266.1-201ENST00000610958 165 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 AC245014.3-201ENST00000618589 347 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms