Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RN7SKP160-201ENST00000363804 340 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 SNORA12.2-201ENST00000391040 156 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 RNU2-61P-201ENST00000411069 191 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 DPPA2P2-201ENST00000418220 897 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 GAPDHP58-201ENST00000438477 1006 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 snoU13.29-201ENST00000459370 104 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 SNRPCP3-201ENST00000474888 476 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 RN7SL799P-201ENST00000475891 298 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 AC074133.1-201ENST00000515696 183 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 RNU6-1012P-201ENST00000516606 109 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 RNA5SP34-201ENST00000516887 130 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 RNU2-31P-201ENST00000516954 155 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 RPL23AP87-202ENST00000573039 466 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 MIR4282-201ENST00000583613 67 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 AC123912.5-201ENST00000605470 343 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 AC090607.5-201ENST00000615692 224 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 MTND1P7-201ENST00000632801 297 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 AC114947.2-201ENST00000565748 2125 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 AC007685.1-201ENST00000329806 452 ntBASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 Y_RNA.441-201ENST00000384123 112 ntBASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 AC063979.1-201ENST00000415539 377 ntBASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 CYCSP12-201ENST00000437729 300 ntBASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 AL596266.1-201ENST00000448132 400 ntBASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 Y_RNA.638-201ENST00000459374 113 ntBASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 RNU6-615P-201ENST00000516065 106 ntBASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 IGLV3-24-201ENST00000517477 197 ntBASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 EIF4A2P5-201ENST00000529914 499 ntBASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 AC137627.1-201ENST00000545761 289 ntBASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 FAM60BP-201ENST00000578364 658 ntBASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 MIR4659A-201ENST00000580269 81 ntBASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 MIR4433B-201ENST00000581329 102 ntBASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 AL589674.2-201ENST00000604304 337 ntBASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 AC037487.3-201ENST00000606668 112 ntBASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 AC004852.3-201ENST00000614131 326 ntBASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCUBE3Q8IX30 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SCUBE3Q8IX30 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.96□□□□□ -1.45
SCUBE3Q8IX30 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
SCUBE3Q8IX30 AC138907.8-201ENST00000623981 2256 ntBASIC5.96□□□□□ -1.45
SCUBE3Q8IX30 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SCUBE3Q8IX30 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 RNU6-215P-201ENST00000365169 102 ntBASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 RNU1-136P-201ENST00000384181 164 ntBASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.580-201ENST00000391004 95 ntBASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 SNORD78.2-201ENST00000391076 69 ntBASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 RNU6-651P-201ENST00000411040 105 ntBASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 AL096701.2-201ENST00000416920 238 ntBASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 USP9YP7-201ENST00000436723 430 ntBASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 USP9YP32-201ENST00000452432 430 ntBASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 RPL23AP2-201ENST00000471227 466 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms