Protein–RNA interactions for Protein: Q8IWP9

CCDC28A, Coiled-coil domain-containing protein 28A, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28AQ8IWP9 AC078785.3-201ENST00000476607 425 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 RPS4XP13-201ENST00000483219 789 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 FAM92A1P2-202ENST00000504766 877 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 SEPT14P4-201ENST00000513445 186 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 RNU6-927P-201ENST00000516199 100 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 FO082796.1-201ENST00000523795 183 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 MTND1P35-201ENST00000526739 508 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 OR5D15P-201ENST00000531671 942 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 NOP10-202ENST00000557912 436 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 MIR4775-201ENST00000581168 75 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AC002545.1-201ENST00000592511 181 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AC104763.2-201ENST00000604179 382 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AL512329.2-201ENST00000607350 548 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AL365204.3-201ENST00000612448 685 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AP001486.3-201ENST00000615334 372 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AL354950.2-201ENST00000617939 290 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 uc_338.11-201ENST00000619132 160 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AC092628.2-201ENST00000622492 339 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AC048347.1-201ENST00000624621 427 ntBASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 FER-210ENST00000628534 558 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC28AQ8IWP9 AC008568.2-201ENST00000623862 2313 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AL672296.1-201ENST00000427780 2158 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 CKAP2P1-201ENST00000555477 2049 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 Y_RNA.89-201ENST00000363031 102 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 RNU6-996P-201ENST00000365438 107 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 RNU6-61P-201ENST00000365528 109 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 U1.1-201ENST00000384101 164 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 MIR223-201ENST00000385204 110 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 SOD2P1-201ENST00000396543 562 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 Z97832.1-201ENST00000402490 328 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 MIR1286-201ENST00000408112 78 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 RPL30P2-201ENST00000414021 291 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AL590383.1-201ENST00000428602 75 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AC114755.5-201ENST00000447760 831 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 RPS29P15-201ENST00000458329 171 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 RNU6-953P-201ENST00000459154 107 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AC018638.3-201ENST00000461273 132 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 GMFBP1-201ENST00000467831 427 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AC233702.1-201ENST00000482905 502 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 RN7SL30P-201ENST00000488416 306 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 RNU6-1256P-201ENST00000516539 103 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 RNA5SP73-201ENST00000516744 108 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 RNU6-677P-201ENST00000516914 101 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 RNU6-835P-201ENST00000516974 104 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 RNA5SP503-201ENST00000517047 117 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 IGKV2-18-201ENST00000522607 343 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 HIGD1AP5-201ENST00000529959 259 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 OR5B19P-201ENST00000531766 928 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AC068831.4-201ENST00000556118 109 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AP005205.1-201ENST00000563503 508 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 MIR3186-201ENST00000577404 85 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AP001029.3-201ENST00000588063 596 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AC008752.3-201ENST00000588113 712 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AC020910.2-201ENST00000603635 610 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 MFSD8-216ENST00000641147 4009 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 OTUD4P1-201ENST00000237841 3067 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 AC006020.1-201ENST00000420179 1854 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 API5P2-201ENST00000397055 1498 ntBASIC3.73□□□□□ -1.81
CCDC28AQ8IWP9 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms