Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RNU6-1127P-201ENST00000384580 107 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 RNU6-308P-201ENST00000390957 107 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 RNA5SP241-201ENST00000391326 114 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AL035079.1-201ENST00000405210 287 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 HSPE1P8-201ENST00000406997 288 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 RNU4-14P-201ENST00000410858 122 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AL139396.1-201ENST00000421137 167 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 PRDX3P3-201ENST00000447765 522 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 RPS15AP27-201ENST00000449183 343 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 CCDC34P1-201ENST00000507441 517 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AC079140.5-201ENST00000507882 310 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AC017037.1-201ENST00000508460 471 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 SNORA31.3-201ENST00000516029 96 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 RNU6-864P-201ENST00000516256 108 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 RN7SKP92-201ENST00000517266 244 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 MYL12AP1-201ENST00000518490 515 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 OR11H5P-201ENST00000554039 926 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AC002545.1-201ENST00000592511 181 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 BNIP3P25-201ENST00000596023 559 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 DPPA3P3-201ENST00000603842 430 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AL359757.2-201ENST00000624309 274 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AC119674.1-207ENST00000641355 633 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AC007390.2-201ENST00000606229 3803 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 SNORA7.2-201ENST00000364446 145 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 RNU6-393P-201ENST00000384475 107 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 RNA5SP219-201ENST00000390940 113 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AL591848.1-201ENST00000413092 322 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AC079780.1-201ENST00000428259 207 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AL356867.1-201ENST00000429623 299 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AC008264.1-201ENST00000447612 367 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 RPS24P6-201ENST00000452670 400 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 RPS5P7-201ENST00000456664 608 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 snoU13.4-201ENST00000458916 104 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 snoU13.24-201ENST00000458998 104 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 RPL12P20-201ENST00000475538 479 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 S100A11P1-201ENST00000477525 312 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 HMGB3P15-201ENST00000507326 574 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AL359273.1-201ENST00000510918 627 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 Y_RNA.720-201ENST00000517166 92 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 SNORA25.17-201ENST00000517184 124 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 SNRPGP16-201ENST00000533275 226 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AC110588.1-201ENST00000559699 137 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 RN7SL290P-201ENST00000578661 300 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 7SK.7-201ENST00000603504 247 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AP002826.1-201ENST00000608835 315 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 uc_338.15-201ENST00000615470 191 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 MIR6758-201ENST00000620653 63 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AC091925.1-201ENST00000623204 462 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AC067931.1-201ENST00000624190 671 ntBASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms