Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 PPIAP3-201ENST00000450588 505 ntBASIC5.39□□□□□ -1.55
USP48Q86UV5 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.39□□□□□ -1.55
USP48Q86UV5 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.39□□□□□ -1.55
USP48Q86UV5 AL132838.2-201ENST00000492041 314 ntBASIC5.39□□□□□ -1.55
USP48Q86UV5 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.39□□□□□ -1.55
USP48Q86UV5 AC008694.2-201ENST00000517591 306 ntBASIC5.39□□□□□ -1.55
USP48Q86UV5 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.39□□□□□ -1.55
USP48Q86UV5 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.39□□□□□ -1.55
USP48Q86UV5 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.39□□□□□ -1.55
USP48Q86UV5 RPS3AP23-202ENST00000574601 686 ntBASIC5.39□□□□□ -1.55
USP48Q86UV5 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.39□□□□□ -1.55
USP48Q86UV5 IGHV3-29-201ENST00000604817 344 ntBASIC5.39□□□□□ -1.55
USP48Q86UV5 BMS1P21-201ENST00000634565 365 ntBASIC5.39□□□□□ -1.55
USP48Q86UV5 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP48Q86UV5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.39□□□□□ -1.55
USP48Q86UV5 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP48Q86UV5 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP48Q86UV5 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP48Q86UV5 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.39□□□□□ -1.55
USP48Q86UV5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP48Q86UV5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
USP48Q86UV5 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
USP48Q86UV5 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP48Q86UV5 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
USP48Q86UV5 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.38□□□□□ -1.55
USP48Q86UV5 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
USP48Q86UV5 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP48Q86UV5 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.38□□□□□ -1.55
USP48Q86UV5 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP48Q86UV5 AC073343.1-201ENST00000328239 651 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
USP48Q86UV5 MIR331-201ENST00000362302 94 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 RNU6-1249P-201ENST00000363237 111 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 Y_RNA.333-201ENST00000365274 102 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
USP48Q86UV5 PTMAP2-201ENST00000397627 327 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP48Q86UV5 RN7SKP159-201ENST00000410657 292 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 CYCSP19-201ENST00000411715 316 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.38□□□□□ -1.55
USP48Q86UV5 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.38□□□□□ -1.55
USP48Q86UV5 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.38□□□□□ -1.55
USP48Q86UV5 RPL7P2-201ENST00000427639 268 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 RPL36AP53-201ENST00000432891 316 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 MTATP6P16-201ENST00000434543 526 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 AC007677.1-201ENST00000445757 515 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.38□□□□□ -1.55
USP48Q86UV5 RPL38P4-201ENST00000502376 214 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 AC116562.3-201ENST00000506136 177 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.38□□□□□ -1.55
USP48Q86UV5 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.38□□□□□ -1.55
USP48Q86UV5 AC068587.5-201ENST00000528506 175 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.38□□□□□ -1.55
USP48Q86UV5 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.38□□□□□ -1.55
USP48Q86UV5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.38□□□□□ -1.55
USP48Q86UV5 ARL2BPP2-201ENST00000550907 489 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.38□□□□□ -1.55
USP48Q86UV5 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.38□□□□□ -1.55
USP48Q86UV5 MIR6867-201ENST00000610636 67 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.38□□□□□ -1.55
USP48Q86UV5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.38□□□□□ -1.55
USP48Q86UV5 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP48Q86UV5 LARP1BP1-201ENST00000506036 1359 ntBASIC5.38□□□□□ -1.55
USP48Q86UV5 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.38□□□□□ -1.55
USP48Q86UV5 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.37□□□□□ -1.55
USP48Q86UV5 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP48Q86UV5 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP48Q86UV5 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP48Q86UV5 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP48Q86UV5 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP48Q86UV5 SNORA71.3-201ENST00000362582 128 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP48Q86UV5 RNU6-767P-201ENST00000384132 107 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 RNU2-36P-201ENST00000410361 191 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.37□□□□□ -1.55
USP48Q86UV5 RPL21P91-201ENST00000429231 479 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.37□□□□□ -1.55
USP48Q86UV5 HMGB3P9-201ENST00000441799 583 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 CBWD4P-201ENST00000445695 655 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 AC073415.1-201ENST00000449240 153 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 RNU7-182P-201ENST00000459009 62 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 SNORD97-201ENST00000459187 142 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 AC022795.1-201ENST00000473808 480 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 RPS15AP36-201ENST00000492022 382 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 NIPA2P2-201ENST00000496376 1083 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP48Q86UV5 AC026427.2-201ENST00000506228 536 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP48Q86UV5 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.37□□□□□ -1.55
USP48Q86UV5 AC026801.2-201ENST00000515352 425 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 RNU6-1095P-201ENST00000516148 108 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 HMGB1P19-201ENST00000517578 577 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.37□□□□□ -1.55
USP48Q86UV5 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.37□□□□□ -1.55
USP48Q86UV5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.37□□□□□ -1.55
USP48Q86UV5 MIR4293-201ENST00000584305 78 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 AC010525.2-201ENST00000590920 195 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 RPL7P50-201ENST00000600588 727 ntBASIC5.37□□□□□ -1.55
USP48Q86UV5 AC113403.1-201ENST00000604910 193 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms