Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MIR184-201ENST00000384962 84 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 MIR200C-201ENST00000384980 68 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
LDB1Q86U70 SNORD17-201ENST00000390930 237 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 SNORA48.7-201ENST00000391302 135 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 SNORA26.8-201ENST00000391306 124 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
LDB1Q86U70 RNU4-65P-201ENST00000410473 140 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 HMGN1P24-201ENST00000412282 298 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 RPL17P12-201ENST00000413391 526 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 Z99755.1-201ENST00000414048 380 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.42□□□□□ -1.86
LDB1Q86U70 NPM1P11-201ENST00000417106 855 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 PPP1R11P2-201ENST00000423543 382 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LDB1Q86U70 AC091286.1-201ENST00000431233 461 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 RPL26P6-201ENST00000440913 438 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AC118469.1-201ENST00000442943 488 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 COX6CP12-201ENST00000446748 202 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 Z83846.1-201ENST00000446798 265 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 SNRPGP3-201ENST00000469405 227 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 RPL23AP41-201ENST00000484754 458 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AC020893.1-201ENST00000502452 580 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
LDB1Q86U70 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
LDB1Q86U70 AF131216.2-201ENST00000512316 564 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.42□□□□□ -1.86
LDB1Q86U70 SNORA70.19-201ENST00000516717 90 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 RNU6-1231P-201ENST00000517185 103 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.42□□□□□ -1.86
LDB1Q86U70 AC103843.2-201ENST00000530523 682 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AP000907.2-201ENST00000530827 353 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.42□□□□□ -1.86
LDB1Q86U70 AL133271.1-201ENST00000538229 291 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.42□□□□□ -1.86
LDB1Q86U70 SYF2P1-201ENST00000550658 413 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AL391156.1-201ENST00000554965 554 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.42□□□□□ -1.86
LDB1Q86U70 MIR4425-201ENST00000580572 84 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.42□□□□□ -1.86
LDB1Q86U70 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
LDB1Q86U70 AP001029.3-201ENST00000588063 596 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.42□□□□□ -1.86
LDB1Q86U70 AC068790.3-201ENST00000602988 553 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AC004067.1-201ENST00000608733 700 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.42□□□□□ -1.86
LDB1Q86U70 OR10AB1P-201ENST00000609613 938 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AC027807.2-201ENST00000616099 408 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AC012150.2-201ENST00000621300 544 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AC112204.3-201ENST00000623822 332 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AC019226.1-201ENST00000625666 515 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 AC032011.1-201ENST00000611703 1549 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
LDB1Q86U70 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.42□□□□□ -1.86
LDB1Q86U70 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LDB1Q86U70 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LDB1Q86U70 PRO1804-201ENST00000623780 2050 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 MTND4P4-201ENST00000439033 1366 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LDB1Q86U70 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LDB1Q86U70 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LDB1Q86U70 DDX10P1-201ENST00000448545 1933 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.41□□□□□ -1.86
LDB1Q86U70 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.41□□□□□ -1.86
LDB1Q86U70 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LDB1Q86U70 Y_RNA.46-201ENST00000362695 102 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LDB1Q86U70 AP002088.1-201ENST00000382740 395 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 RNU6-533P-201ENST00000384144 107 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 RNU6-432P-201ENST00000384196 109 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 SNORD116-2-201ENST00000384274 95 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 SNORD116-6-201ENST00000384711 96 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 PTMAP5-201ENST00000393073 333 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 RPS20P2-201ENST00000402520 389 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.41□□□□□ -1.86
LDB1Q86U70 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.41□□□□□ -1.86
LDB1Q86U70 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.41□□□□□ -1.86
LDB1Q86U70 RABEPKP1-201ENST00000440529 1026 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 TRIM60P18-201ENST00000441518 828 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 TPT1P14-201ENST00000448018 505 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.41□□□□□ -1.86
LDB1Q86U70 AC010468.1-201ENST00000461022 817 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 AC092754.2-201ENST00000463506 460 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.41□□□□□ -1.86
LDB1Q86U70 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.41□□□□□ -1.86
LDB1Q86U70 AC055855.1-201ENST00000489563 579 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 AC112204.1-201ENST00000502591 103 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 CBX3P3-201ENST00000508108 532 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 OR5BM1P-201ENST00000512021 366 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.41□□□□□ -1.86
LDB1Q86U70 RNU1-61P-201ENST00000516107 151 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 RNU6-201P-201ENST00000517100 61 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 HIGD1AP10-201ENST00000527837 282 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 OR5B10P-201ENST00000532869 642 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.41□□□□□ -1.86
LDB1Q86U70 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LDB1Q86U70 OR4T1P-201ENST00000554933 911 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.41□□□□□ -1.86
LDB1Q86U70 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms