Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 AC012170.1-201ENST00000495139 359 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AC005912.1-201ENST00000495392 255 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 SUMO2P20-201ENST00000520803 283 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 COPS8P3-201ENST00000526024 482 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AC109635.4-202ENST00000531666 412 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 MIR3158-1-201ENST00000583596 81 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AC004853.1-201ENST00000604902 698 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AC078938.1-201ENST00000620993 318 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AC091953.5-201ENST00000622919 233 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AC091903.1-201ENST00000624322 454 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 TAB3P1-202ENST00000452645 1634 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AL353743.4-201ENST00000422653 1547 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 RNF6P1-201ENST00000444889 1784 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AP005901.5-201ENST00000545779 1796 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 ZNF285B-201ENST00000561698 1767 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 Y_RNA.18-201ENST00000362461 102 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 Y_RNA.302-201ENST00000364997 102 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 Y_RNA.445-201ENST00000384168 102 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 MIR92A2-201ENST00000385299 75 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 RNA5SP424-201ENST00000390988 115 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 RNU6-244P-201ENST00000391028 104 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 CISD1P1-201ENST00000393907 327 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 RPL21P17-201ENST00000397467 475 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 RPS3AP36-201ENST00000398190 775 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 RNU6ATAC-201ENST00000408749 126 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 RNA5SP498-201ENST00000411342 120 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 HMGB3P2-201ENST00000411913 584 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC004552.1-201ENST00000419089 348 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 SNRPEP10-201ENST00000420249 274 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 RPL7P44-201ENST00000424827 742 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 MTCO3P46-201ENST00000425787 232 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AL356535.1-201ENST00000440335 398 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC245517.2-201ENST00000442890 346 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 RPS27P5-201ENST00000444247 244 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC005229.2-201ENST00000456995 399 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 RNU6-420P-201ENST00000458780 107 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 RNU7-140P-201ENST00000459546 60 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 RPS26P3-201ENST00000470205 348 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC023598.1-201ENST00000472521 361 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 TRBV1-201ENST00000476502 284 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC090543.2-201ENST00000483963 348 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC004057.1-201ENST00000485827 348 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 HMGB1P29-201ENST00000505659 499 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 RNU6-1170P-201ENST00000515974 106 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 RNU1-95P-201ENST00000516357 160 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 RNU1-128P-201ENST00000516704 160 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC008083.2-201ENST00000546707 476 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 BNIP3P26-201ENST00000600827 554 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 NRBF2P5-201ENST00000603087 788 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AC021646.1-201ENST00000605469 484 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 AL390240.1-201ENST00000612950 384 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 CR392039.5-201ENST00000623201 510 ntBASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
BHLHA9Q7RTU4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms