Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 Y_RNA.22-201ENST00000362492 102 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 RNY3P3-201ENST00000363816 102 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 SNORA69-201ENST00000383895 132 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 RNA5SP332-201ENST00000391063 115 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 CYB5AP4-201ENST00000396692 399 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AL591416.1-201ENST00000404015 867 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 RNU6-712P-201ENST00000410558 100 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 MTCO3P12-201ENST00000416718 547 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 RPEP3-201ENST00000425462 676 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 RPS20P5-201ENST00000434808 360 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 RPL35AP22-201ENST00000436855 335 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 SEPT14P3-201ENST00000439401 183 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 SNRPEP8-201ENST00000442866 260 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AL732372.2-207ENST00000445840 183 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AL162591.2-201ENST00000449634 317 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 SEPT14P2-201ENST00000453405 183 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 RPL21P126-201ENST00000470049 478 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 HSPD1P15-201ENST00000505573 1122 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 SEPT14P4-201ENST00000513445 186 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 RNU6-507P-201ENST00000516045 100 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 SNORA40.12-201ENST00000516329 111 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 RNU6-64P-201ENST00000517119 105 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 FO082796.1-201ENST00000523795 183 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 DEFB108D-201ENST00000527787 222 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AP001646.1-201ENST00000527936 915 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AC084783.1-201ENST00000565846 910 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AL035413.2-201ENST00000604801 525 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AC063943.3-201ENST00000615562 356 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AL021997.2-201ENST00000615674 271 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AP005264.7-201ENST00000625003 745 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 CKAP2P1-201ENST00000555477 2049 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 AC244517.1-201ENST00000606030 2086 ntBASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PTCHD4Q6ZW05 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 RAD17P1-201ENST00000418130 2042 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 RNU6-451P-201ENST00000362921 107 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 RNU6-511P-201ENST00000363496 107 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 Y_RNA.160-201ENST00000363677 92 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 RNA5SP175-201ENST00000364275 119 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 Y_RNA.367-201ENST00000365544 101 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 MIR558-201ENST00000384920 94 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 MIR607-201ENST00000385241 96 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 AL356776.1-201ENST00000406574 447 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 RNA5SP107-201ENST00000411358 122 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 TMSB10P2-201ENST00000416049 131 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 SNRPEP10-201ENST00000420249 274 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 BEND7P1-201ENST00000422058 457 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 RPL23AP38-201ENST00000423801 469 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 USP12PX-201ENST00000432383 1057 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 CYCSP43-201ENST00000438233 310 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 HMGB3P22-202ENST00000451823 572 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 RNU7-63P-201ENST00000459054 62 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 RNU6-261P-201ENST00000459506 102 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 RPL31P13-201ENST00000484151 370 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 AC041039.1-201ENST00000485656 536 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 AC008628.2-201ENST00000502605 298 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 AC018710.1-201ENST00000506509 158 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 AC114781.4-201ENST00000513707 639 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 AF235103.2-201ENST00000525753 346 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 AC126177.3-201ENST00000551839 688 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 AL354984.3-201ENST00000604803 325 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 IGHV3-29-201ENST00000604817 344 ntBASIC3.87□□□□□ -1.79
PTCHD4Q6ZW05 AC110741.2-201ENST00000605278 268 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms