Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 RNA5SP82-201ENST00000516707 92 ntBASIC1.94□□□□□ -2.1
UBR3Q6ZT12 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.94□□□□□ -2.1
UBR3Q6ZT12 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.94□□□□□ -2.1
UBR3Q6ZT12 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.94□□□□□ -2.1
UBR3Q6ZT12 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.94□□□□□ -2.1
UBR3Q6ZT12 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UBR3Q6ZT12 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
UBR3Q6ZT12 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
UBR3Q6ZT12 RPL21P1-201ENST00000399532 476 ntBASIC1.94□□□□□ -2.1
UBR3Q6ZT12 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.94□□□□□ -2.1
UBR3Q6ZT12 CASP3P1-201ENST00000446037 609 ntBASIC1.94□□□□□ -2.1
UBR3Q6ZT12 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.94□□□□□ -2.1
UBR3Q6ZT12 OR51B8P-201ENST00000449892 769 ntBASIC1.94□□□□□ -2.1
UBR3Q6ZT12 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.94□□□□□ -2.1
UBR3Q6ZT12 AC034244.1-201ENST00000507687 207 ntBASIC1.94□□□□□ -2.1
UBR3Q6ZT12 RNU1-92P-201ENST00000517017 135 ntBASIC1.94□□□□□ -2.1
UBR3Q6ZT12 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.94□□□□□ -2.1
UBR3Q6ZT12 SEPT7P9-203ENST00000604116 343 ntBASIC1.94□□□□□ -2.1
UBR3Q6ZT12 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
UBR3Q6ZT12 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
UBR3Q6ZT12 MIR517C-201ENST00000385103 95 ntBASIC1.93□□□□□ -2.1
UBR3Q6ZT12 AL136133.1-201ENST00000413694 376 ntBASIC1.93□□□□□ -2.1
UBR3Q6ZT12 SSXP9-201ENST00000417503 292 ntBASIC1.93□□□□□ -2.1
UBR3Q6ZT12 AC009474.2-201ENST00000451383 136 ntBASIC1.93□□□□□ -2.1
UBR3Q6ZT12 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.93□□□□□ -2.1
UBR3Q6ZT12 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.93□□□□□ -2.1
UBR3Q6ZT12 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.93□□□□□ -2.1
UBR3Q6ZT12 AC090255.1-201ENST00000495779 349 ntBASIC1.93□□□□□ -2.1
UBR3Q6ZT12 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.93□□□□□ -2.1
UBR3Q6ZT12 AL589935.2-201ENST00000616471 1231 ntBASIC1.93□□□□□ -2.1
UBR3Q6ZT12 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
UBR3Q6ZT12 AC098679.5-201ENST00000624394 571 ntBASIC1.93□□□□□ -2.1
UBR3Q6ZT12 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.93□□□□□ -2.1
UBR3Q6ZT12 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
UBR3Q6ZT12 RNU6-582P-201ENST00000362989 107 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 SNORD48-201ENST00000364953 64 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.92□□□□□ -2.1
UBR3Q6ZT12 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.92□□□□□ -2.1
UBR3Q6ZT12 RN7SL274P-201ENST00000492268 272 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.92□□□□□ -2.1
UBR3Q6ZT12 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.92□□□□□ -2.1
UBR3Q6ZT12 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.92□□□□□ -2.1
UBR3Q6ZT12 AL163153.1-201ENST00000554223 283 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.92□□□□□ -2.1
UBR3Q6ZT12 LINC00216-201ENST00000623548 1126 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 AL359740.1-201ENST00000624340 592 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 AC006026.1-201ENST00000444025 1803 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 U8.1-201ENST00000362843 134 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 HMGB3P2-201ENST00000411913 584 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 MTND1P23-201ENST00000416931 372 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 RPL21P39-201ENST00000463605 483 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.92□□□□□ -2.1
UBR3Q6ZT12 TRAV28-201ENST00000557548 323 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 AC234775.3-201ENST00000564612 656 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 MIR3199-1-201ENST00000582434 88 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 ZNF209P-201ENST00000593450 2304 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
UBR3Q6ZT12 OR4G1P-203ENST00000641984 1631 ntBASIC1.92□□□□□ -2.1
UBR3Q6ZT12 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
UBR3Q6ZT12 SNORD114-22-201ENST00000365423 72 ntBASIC1.91□□□□□ -2.1
UBR3Q6ZT12 RNU1-109P-201ENST00000383960 147 ntBASIC1.91□□□□□ -2.1
UBR3Q6ZT12 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
UBR3Q6ZT12 AC073464.3-201ENST00000422564 712 ntBASIC1.91□□□□□ -2.1
UBR3Q6ZT12 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.91□□□□□ -2.1
UBR3Q6ZT12 AL358075.3-201ENST00000426289 226 ntBASIC1.91□□□□□ -2.1
UBR3Q6ZT12 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.91□□□□□ -2.1
UBR3Q6ZT12 RPS4XP11-201ENST00000446897 772 ntBASIC1.91□□□□□ -2.1
UBR3Q6ZT12 AL031659.1-201ENST00000447075 539 ntBASIC1.91□□□□□ -2.1
UBR3Q6ZT12 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.91□□□□□ -2.1
UBR3Q6ZT12 AP000790.1-201ENST00000528891 737 ntBASIC1.91□□□□□ -2.1
UBR3Q6ZT12 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.91□□□□□ -2.1
UBR3Q6ZT12 SETP2-201ENST00000553886 926 ntBASIC1.91□□□□□ -2.1
UBR3Q6ZT12 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.91□□□□□ -2.1
UBR3Q6ZT12 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.91□□□□□ -2.1
UBR3Q6ZT12 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.91□□□□□ -2.1
UBR3Q6ZT12 Y_RNA.354-201ENST00000365448 111 ntBASIC1.9□□□□□ -2.1
UBR3Q6ZT12 RNA5SP489-201ENST00000410986 109 ntBASIC1.9□□□□□ -2.1
UBR3Q6ZT12 AL451074.3-201ENST00000437709 472 ntBASIC1.9□□□□□ -2.1
UBR3Q6ZT12 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.9□□□□□ -2.1
UBR3Q6ZT12 Z99714.1-201ENST00000450463 807 ntBASIC1.9□□□□□ -2.1
UBR3Q6ZT12 OR4K8P-201ENST00000578842 1048 ntBASIC1.9□□□□□ -2.1
UBR3Q6ZT12 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
UBR3Q6ZT12 SNORD56.5-201ENST00000364281 72 ntBASIC1.9□□□□□ -2.11
UBR3Q6ZT12 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.9□□□□□ -2.11
UBR3Q6ZT12 AC022022.1-201ENST00000430304 178 ntBASIC1.9□□□□□ -2.11
UBR3Q6ZT12 AC010683.1-201ENST00000473673 378 ntBASIC1.9□□□□□ -2.11
UBR3Q6ZT12 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.9□□□□□ -2.11
UBR3Q6ZT12 SNORA31.24-201ENST00000517232 57 ntBASIC1.9□□□□□ -2.11
UBR3Q6ZT12 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.9□□□□□ -2.11
UBR3Q6ZT12 AP001029.3-201ENST00000588063 596 ntBASIC1.9□□□□□ -2.11
UBR3Q6ZT12 HSPE1P14-201ENST00000605812 302 ntBASIC1.9□□□□□ -2.11
UBR3Q6ZT12 AL110115.1-201ENST00000614396 364 ntBASIC1.9□□□□□ -2.11
UBR3Q6ZT12 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.9□□□□□ -2.11
UBR3Q6ZT12 MIR6767-201ENST00000637302 66 ntBASIC1.9□□□□□ -2.11
UBR3Q6ZT12 MAPK10-266ENST00000641066 6555 ntBASIC1.9□□□□□ -2.11
UBR3Q6ZT12 CR382285.2-201ENST00000624662 1495 ntBASIC1.89□□□□□ -2.11
UBR3Q6ZT12 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
UBR3Q6ZT12 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.89□□□□□ -2.11
UBR3Q6ZT12 Y_RNA.112-201ENST00000363250 102 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms