Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC093908.1-201ENST00000623125 8092 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 SNORA75-201ENST00000384158 137 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 RPL7P25-201ENST00000404151 721 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AC092447.6-201ENST00000414578 210 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 CRYBB2P1-203ENST00000415709 538 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AC099677.1-201ENST00000420575 175 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 SETP5-201ENST00000437270 562 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 USP9YP29-201ENST00000445112 563 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 SSXP1-201ENST00000453640 473 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 MTND1P9-201ENST00000453775 944 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 RPL23AP67-201ENST00000465341 474 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AC006390.1-201ENST00000508068 283 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 PCBP2P3-201ENST00000509726 843 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AC079140.3-201ENST00000511111 550 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 MTND3P5-201ENST00000512798 333 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AC017037.2-201ENST00000513850 890 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AC116347.2-201ENST00000514912 523 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 RNU6-201P-201ENST00000517100 61 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AP002748.2-201ENST00000528671 348 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 MIR3158-1-201ENST00000583596 81 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AC119751.7-201ENST00000600494 245 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 HMGN2P28-201ENST00000606102 262 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 SNORA51-201ENST00000606420 132 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 U3.45-201ENST00000607547 219 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 AC100793.4-201ENST00000613683 429 ntBASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
SYNE3Q6ZMZ3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 RNU6-853P-201ENST00000364306 107 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 MTCYBP36-201ENST00000404146 440 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 HSPE1P26-201ENST00000405341 275 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 Y_RNA.608-201ENST00000410647 95 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 CDK8P2-201ENST00000415020 547 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AC091286.1-201ENST00000431233 461 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AP000936.2-201ENST00000447151 681 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AP1S2P1-201ENST00000457344 379 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 MTCO1P42-201ENST00000457379 726 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 SNORD42A-201ENST00000459584 64 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AC110768.1-201ENST00000509222 400 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 SNORA67.7-201ENST00000516664 135 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AC022878.1-201ENST00000530684 149 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 OR4P1P-201ENST00000530808 1136 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AC018630.1-201ENST00000541376 925 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 MIR548AB-201ENST00000584917 84 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AC005771.1-201ENST00000585581 349 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 TPMTP1-201ENST00000592307 737 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AC245389.1-201ENST00000605141 529 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AC027807.2-201ENST00000616099 408 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AC006133.1-201ENST00000617106 264 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AC099654.13-201ENST00000639774 207 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AC005183.1-201ENST00000603687 1979 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AC032011.1-201ENST00000611703 1549 ntBASIC4.05□□□□□ -1.76
SYNE3Q6ZMZ3 AC009902.3-201ENST00000606235 2172 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms