Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PRRC2CP1-201ENST00000404428 159 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 MIR1252-201ENST00000408861 65 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 MTCO3P19-201ENST00000415864 321 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF43Q68DV7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF43Q68DV7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF43Q68DV7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF43Q68DV7 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 AC073264.2-201ENST00000448886 166 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 IGHV5-78-201ENST00000450948 295 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 MTND4LP30-201ENST00000454092 297 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF43Q68DV7 AC090686.1-201ENST00000481577 749 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 AC010350.1-201ENST00000504908 231 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 SCARNA16.2-201ENST00000516520 172 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 RNU1-54P-201ENST00000517181 120 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.21□□□□□ -1.58
RNF43Q68DV7 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.21□□□□□ -1.58
RNF43Q68DV7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF43Q68DV7 AP003385.6-201ENST00000531603 374 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF43Q68DV7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.21□□□□□ -1.58
RNF43Q68DV7 LSM6P2-201ENST00000552208 177 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF43Q68DV7 AC096772.1-201ENST00000609146 564 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF43Q68DV7 AL512643.1-201ENST00000635735 524 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF43Q68DV7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RNF43Q68DV7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF43Q68DV7 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RNF43Q68DV7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF43Q68DV7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF43Q68DV7 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF43Q68DV7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF43Q68DV7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF43Q68DV7 AC097714.1-201ENST00000511272 1647 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF43Q68DV7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF43Q68DV7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
RNF43Q68DV7 AC126755.2-208ENST00000327792 462 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 AC138969.1-213ENST00000331436 462 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 Y_RNA.39-201ENST00000362620 98 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 RNU6-511P-201ENST00000363496 107 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 SNORA70.2-201ENST00000364506 135 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 MIR19A-201ENST00000384878 82 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 MIR23A-201ENST00000385245 73 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 SNORA77-201ENST00000408716 125 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 AL590632.1-201ENST00000424289 371 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.2□□□□□ -1.58
RNF43Q68DV7 RPL37P1-201ENST00000432310 284 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 UBE2V1P13-201ENST00000436983 439 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 HIGD1AP11-201ENST00000438361 280 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 RPL7AP61-201ENST00000443410 636 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 FTH1P25-201ENST00000447665 469 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 AC108059.3-201ENST00000456388 214 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 AL445433.1-201ENST00000457507 257 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 RPS23P7-201ENST00000466210 444 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 AC104472.2-201ENST00000469035 601 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 AC068305.1-201ENST00000497406 726 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 AC021146.3-201ENST00000511911 260 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 AC018797.3-201ENST00000513388 1241 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 Y_RNA.673-201ENST00000516306 88 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 RNU2-10P-201ENST00000516375 211 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 RNA5SP384-201ENST00000516615 116 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 AP006289.1-201ENST00000538089 277 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 MIR4737-201ENST00000583979 81 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 AC115085.1-201ENST00000588924 229 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 RNF138P2-201ENST00000603490 592 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 AC020910.3-201ENST00000603701 874 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 AC010201.1-201ENST00000605051 540 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 MTND4LP5-201ENST00000605152 292 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 AC010424.2-201ENST00000607594 443 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF43Q68DV7 AL049794.2-201ENST00000616301 365 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF43Q68DV7 AC025034.2-201ENST00000623264 286 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 AC083843.3-201ENST00000623679 2186 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RNF43Q68DV7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF43Q68DV7 SDAD1P1-202ENST00000524156 2051 ntBASIC5.2□□□□□ -1.58
RNF43Q68DV7 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF43Q68DV7 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF43Q68DV7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF43Q68DV7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF43Q68DV7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF43Q68DV7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF43Q68DV7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RNF43Q68DV7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF43Q68DV7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.19□□□□□ -1.58
RNF43Q68DV7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF43Q68DV7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
RNF43Q68DV7 RNU6-1287P-201ENST00000362914 107 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 Y_RNA.180-201ENST00000363867 113 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 RNA5SP223-201ENST00000365174 120 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 Y_RNA.376-201ENST00000365638 108 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 SNORA2.3-201ENST00000383920 135 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 RNU6-1060P-201ENST00000384664 107 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 Y_RNA.562-201ENST00000384695 113 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 Y_RNA.576-201ENST00000384781 102 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms