Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC004817.2-201ENST00000561794 651 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 MIR4660-201ENST00000583549 74 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 AL669831.4-202ENST00000590817 238 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 IGHV3-29-201ENST00000604817 344 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC009229.3-201ENST00000608056 282 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 PISRT1.1-201ENST00000616930 107 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC007998.5-201ENST00000622938 237 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC020633.1-201ENST00000468439 2247 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC006484.1-201ENST00000435086 1884 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC092376.2-201ENST00000622621 4116 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC108751.5-201ENST00000492880 1336 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 SNORD3E-201ENST00000362899 217 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 Y_RNA.557-201ENST00000384680 107 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 RNU6-1050P-201ENST00000410388 107 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC092809.3-201ENST00000415453 231 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 RPL21P109-201ENST00000422213 475 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC104333.2-201ENST00000422630 192 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 RPL7P37-201ENST00000425095 738 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 RPL12P18-201ENST00000437175 325 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 EIF4A1P11-201ENST00000451239 222 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC087884.1-201ENST00000469738 328 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC026782.1-201ENST00000512952 449 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC026801.2-201ENST00000515352 425 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 SNORA74C-1-201ENST00000580726 201 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC012669.1-201ENST00000603209 283 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC006157.1-201ENST00000611750 366 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC011890.2-201ENST00000613393 294 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AL122125.1-201ENST00000616999 600 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AL162373.1-201ENST00000620433 407 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 PLCE1P1-201ENST00000622094 305 ntBASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DQA1Q5Y7H0 AP005432.1-201ENST00000580891 3485 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC066616.2-201ENST00000559334 1481 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 HSPA8P4-201ENST00000511877 1920 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC074029.4-201ENST00000624796 1859 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 Y_RNA.47-201ENST00000362697 108 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 Y_RNA.364-201ENST00000365532 101 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 RNU6-26P-201ENST00000383985 107 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 RNU6-434P-201ENST00000384376 107 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 RNY1P14-201ENST00000384426 108 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 AL583834.1-201ENST00000406943 343 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 HMGB3P2-201ENST00000411913 584 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 COX6B1P1-201ENST00000415962 213 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 AL669831.1-202ENST00000428504 417 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 RPL12P46-201ENST00000436610 195 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 HIGD1AP11-201ENST00000438361 280 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 Y_RNA.708-201ENST00000516950 96 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 RNU6-323P-201ENST00000521915 107 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC022790.1-201ENST00000522872 204 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 AP006587.4-201ENST00000526053 529 ntBASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1Q5Y7H0 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms