Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RPS4XP13-201ENST00000483219 789 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 RN7SL812P-201ENST00000493791 279 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC019235.1-201ENST00000503847 207 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC026427.2-201ENST00000506228 536 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC117522.1-201ENST00000509821 380 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC010342.1-201ENST00000514047 877 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 SNORA70.16-201ENST00000516390 95 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 MTND4LP26-201ENST00000518144 282 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 NCAPGP2-201ENST00000557911 754 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC022968.1-201ENST00000567372 442 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 MTATP6P3-201ENST00000581686 676 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC069061.3-201ENST00000582254 823 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC025449.1-201ENST00000603896 529 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC067959.1-201ENST00000604334 379 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 U7.8-201ENST00000619968 63 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC139792.3-201ENST00000623525 224 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC005609.4-201ENST00000625071 447 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AL137003.2-201ENST00000606924 2538 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 OR4G2P-202ENST00000641004 1759 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 RNU6-1085P-201ENST00000363576 107 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 Y_RNA.409-201ENST00000383990 98 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 RNU6-641P-201ENST00000384006 107 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 RNU6-701P-201ENST00000384059 107 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 Y_RNA.481-201ENST00000384373 102 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 Y_RNA.554-201ENST00000384672 102 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 MIR3065-201ENST00000390137 79 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 AL133270.1-201ENST00000402635 279 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 AL590002.1-201ENST00000406554 418 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 MIR548F1-201ENST00000408667 84 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 RPS20P14-201ENST00000412545 360 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 RPL36AP6-201ENST00000435770 321 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 AC104164.2-201ENST00000496953 495 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 HSPD1P15-201ENST00000505573 1122 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 BTF3L4P4-201ENST00000506381 449 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 NRON-201ENST00000517270 370 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 MIR4480-201ENST00000582492 71 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 AC020910.2-201ENST00000603635 610 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 AC106900.2-201ENST00000604994 317 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 AL121992.2-201ENST00000606262 256 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 PRO1804-201ENST00000623780 2050 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
RNF220Q5VTB9 NCAPGP1-201ENST00000505112 1814 ntBASIC4.05□□□□□ -1.76
RNF220Q5VTB9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF220Q5VTB9 OR56B2P-202ENST00000641377 2453 ntBASIC4.04□□□□□ -1.76
RNF220Q5VTB9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNF220Q5VTB9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF220Q5VTB9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF220Q5VTB9 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF220Q5VTB9 RNU6-188P-201ENST00000364207 107 ntBASIC4.04□□□□□ -1.76
RNF220Q5VTB9 Y_RNA.372-201ENST00000365599 102 ntBASIC4.04□□□□□ -1.76
RNF220Q5VTB9 AL451054.2-201ENST00000420896 202 ntBASIC4.04□□□□□ -1.76
RNF220Q5VTB9 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF220Q5VTB9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.04□□□□□ -1.76
RNF220Q5VTB9 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.04□□□□□ -1.76
RNF220Q5VTB9 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNF220Q5VTB9 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF220Q5VTB9 MTATP6P30-201ENST00000443540 664 ntBASIC4.04□□□□□ -1.76
RNF220Q5VTB9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNF220Q5VTB9 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.04□□□□□ -1.76
RNF220Q5VTB9 AC013267.1-201ENST00000458227 267 ntBASIC4.04□□□□□ -1.76
RNF220Q5VTB9 AC116562.3-201ENST00000506136 177 ntBASIC4.04□□□□□ -1.76
RNF220Q5VTB9 ARL4AP2-201ENST00000507378 601 ntBASIC4.04□□□□□ -1.76
RNF220Q5VTB9 AC011352.1-201ENST00000512300 793 ntBASIC4.04□□□□□ -1.76
RNF220Q5VTB9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF220Q5VTB9 SCARNA15.2-201ENST00000516409 127 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms