Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 RNU1-146P-201ENST00000364015 165 ntBASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 RNU6-312P-201ENST00000364629 107 ntBASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 RNU6-514P-201ENST00000384208 107 ntBASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 U3.35-201ENST00000408405 208 ntBASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 RNA5SP251-201ENST00000410614 137 ntBASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 AC079809.1-201ENST00000415468 276 ntBASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 AC004129.2-201ENST00000457229 287 ntBASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 RPL30P11-201ENST00000495304 339 ntBASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 AL049539.1-201ENST00000611964 459 ntBASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 SNORD39.4-201ENST00000620099 78 ntBASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 MIR6719-201ENST00000622428 87 ntBASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 AC008785.1-201ENST00000624475 456 ntBASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 IGHVIII-44-202ENST00000636235 289 ntBASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 AP004607.3-201ENST00000530354 3915 ntBASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 RNA5SP131-201ENST00000365452 119 ntBASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 MIR186-201ENST00000384988 86 ntBASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 GLULP6-201ENST00000399502 913 ntBASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 RNU4-65P-201ENST00000410473 140 ntBASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 RPL21P90-201ENST00000415692 466 ntBASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 RNA5SP272-201ENST00000516095 111 ntBASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 Y_RNA.686-201ENST00000516548 134 ntBASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 RNU6-352P-201ENST00000516908 107 ntBASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 TGIF1P1-201ENST00000558095 802 ntBASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 AC104581.2-201ENST00000572227 430 ntBASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 MIR3613-201ENST00000579844 87 ntBASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 OR7E18P-201ENST00000592589 702 ntBASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 AC009318.2-201ENST00000610917 651 ntBASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 STX3-208ENST00000641815 3236 ntBASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNFT1Q5M7Z0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 RPL9P7-201ENST00000330965 580 ntBASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 RNU1-130P-201ENST00000363930 160 ntBASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 RNU4-84P-201ENST00000364200 139 ntBASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 Y_RNA.262-201ENST00000364641 102 ntBASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 Y_RNA.309-201ENST00000365046 111 ntBASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 SNORA70H-201ENST00000383910 135 ntBASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 SNORA70J-201ENST00000384182 135 ntBASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 RNU6-1289P-201ENST00000384431 106 ntBASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 MIR521-1-201ENST00000384902 87 ntBASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 AL357075.1-201ENST00000404107 726 ntBASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 RNU6-607P-201ENST00000411283 108 ntBASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 AL355433.1-201ENST00000422804 300 ntBASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 OOSP1P1-201ENST00000423265 274 ntBASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 CFL1P1-202ENST00000432948 411 ntBASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 AL513043.1-201ENST00000439124 535 ntBASIC5.19□□□□□ -1.58
RNFT1Q5M7Z0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms