Protein–RNA interactions for Protein: Q01831

XPC, DNA repair protein complementing XP-C cells, humanhuman

Predicted RBP Predictions only

Length 940 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPCQ01831 AC006971.1-201ENST00000407916 4486 ntBASIC5.7□□□□□ -1.5
XPCQ01831 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.7□□□□□ -1.5
XPCQ01831 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.7□□□□□ -1.5
XPCQ01831 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
XPCQ01831 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
XPCQ01831 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
XPCQ01831 Y_RNA.22-201ENST00000362492 102 ntBASIC5.7□□□□□ -1.5
XPCQ01831 Y_RNA.72-201ENST00000362894 103 ntBASIC5.7□□□□□ -1.5
XPCQ01831 Y_RNA.813-201ENST00000364639 102 ntBASIC5.7□□□□□ -1.5
XPCQ01831 Y_RNA.263-201ENST00000364659 114 ntBASIC5.7□□□□□ -1.5
XPCQ01831 SNORA70E-201ENST00000384492 135 ntBASIC5.7□□□□□ -1.5
XPCQ01831 RNU6-606P-201ENST00000384721 111 ntBASIC5.7□□□□□ -1.5
XPCQ01831 SNORD96B-201ENST00000386148 79 ntBASIC5.7□□□□□ -1.5
XPCQ01831 MT-TD-201ENST00000387419 68 ntBASIC5.7□□□□□ -1.5
XPCQ01831 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.7□□□□□ -1.5
XPCQ01831 OR1AA1P-201ENST00000419597 916 ntBASIC5.7□□□□□ -1.5
XPCQ01831 OR4K11P-201ENST00000431829 904 ntBASIC5.7□□□□□ -1.5
XPCQ01831 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.7□□□□□ -1.5
XPCQ01831 ELOCP18-201ENST00000434209 337 ntBASIC5.7□□□□□ -1.5
XPCQ01831 AC006480.1-201ENST00000449887 378 ntBASIC5.7□□□□□ -1.5
XPCQ01831 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.7□□□□□ -1.5
XPCQ01831 AC022795.1-201ENST00000473808 480 ntBASIC5.7□□□□□ -1.5
XPCQ01831 AC078785.3-201ENST00000476607 425 ntBASIC5.7□□□□□ -1.5
XPCQ01831 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
XPCQ01831 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.7□□□□□ -1.5
XPCQ01831 AC010486.1-201ENST00000511793 424 ntBASIC5.7□□□□□ -1.5
XPCQ01831 RNA5SP360-201ENST00000516555 118 ntBASIC5.7□□□□□ -1.5
XPCQ01831 RN7SKP116-201ENST00000516902 319 ntBASIC5.7□□□□□ -1.5
XPCQ01831 AP003385.6-201ENST00000531603 374 ntBASIC5.7□□□□□ -1.5
XPCQ01831 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.7□□□□□ -1.5
XPCQ01831 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.7□□□□□ -1.5
XPCQ01831 OR4K8P-201ENST00000578842 1048 ntBASIC5.7□□□□□ -1.5
XPCQ01831 AL669831.4-202ENST00000590817 238 ntBASIC5.7□□□□□ -1.5
XPCQ01831 AL592436.1-201ENST00000605135 558 ntBASIC5.7□□□□□ -1.5
XPCQ01831 AL160281.1-201ENST00000605307 311 ntBASIC5.7□□□□□ -1.5
XPCQ01831 AC019176.2-201ENST00000611579 315 ntBASIC5.7□□□□□ -1.5
XPCQ01831 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.7□□□□□ -1.5
XPCQ01831 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.7□□□□□ -1.5
XPCQ01831 AL034408.1-202ENST00000636088 415 ntBASIC5.7□□□□□ -1.5
XPCQ01831 AC092326.2-201ENST00000624772 1561 ntBASIC5.7□□□□□ -1.5
XPCQ01831 AP000542.2-201ENST00000623199 6179 ntBASIC5.7□□□□□ -1.5
XPCQ01831 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
XPCQ01831 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
XPCQ01831 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
XPCQ01831 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
XPCQ01831 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.69□□□□□ -1.5
XPCQ01831 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
XPCQ01831 RPL7P26-201ENST00000333817 754 ntBASIC5.69□□□□□ -1.5
XPCQ01831 Y_RNA.255-201ENST00000364581 97 ntBASIC5.69□□□□□ -1.5
XPCQ01831 Y_RNA.367-201ENST00000365544 101 ntBASIC5.69□□□□□ -1.5
XPCQ01831 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
XPCQ01831 MIR558-201ENST00000384920 94 ntBASIC5.69□□□□□ -1.5
XPCQ01831 RNU6-373P-201ENST00000411247 98 ntBASIC5.69□□□□□ -1.5
XPCQ01831 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.69□□□□□ -1.5
XPCQ01831 AC093019.1-201ENST00000443135 252 ntBASIC5.69□□□□□ -1.5
XPCQ01831 AC006512.1-201ENST00000468816 291 ntBASIC5.69□□□□□ -1.5
XPCQ01831 DEFB109F-201ENST00000491870 277 ntBASIC5.69□□□□□ -1.5
XPCQ01831 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.69□□□□□ -1.5
XPCQ01831 TMEM248P1-201ENST00000510579 951 ntBASIC5.69□□□□□ -1.5
XPCQ01831 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.69□□□□□ -1.5
XPCQ01831 SNORD27.1-201ENST00000516319 72 ntBASIC5.69□□□□□ -1.5
XPCQ01831 AC026403.1-201ENST00000518938 295 ntBASIC5.69□□□□□ -1.5
XPCQ01831 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.69□□□□□ -1.5
XPCQ01831 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.69□□□□□ -1.5
XPCQ01831 HMGB3P26-201ENST00000560051 582 ntBASIC5.69□□□□□ -1.5
XPCQ01831 AC018638.8-201ENST00000588755 281 ntBASIC5.69□□□□□ -1.5
XPCQ01831 AC011712.1-201ENST00000588959 234 ntBASIC5.69□□□□□ -1.5
XPCQ01831 AL121992.2-201ENST00000606262 256 ntBASIC5.69□□□□□ -1.5
XPCQ01831 AC233309.1-201ENST00000619522 751 ntBASIC5.69□□□□□ -1.5
XPCQ01831 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.69□□□□□ -1.5
XPCQ01831 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
XPCQ01831 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
XPCQ01831 AC116667.1-201ENST00000604855 2072 ntBASIC5.68□□□□□ -1.5
XPCQ01831 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
XPCQ01831 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
XPCQ01831 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.68□□□□□ -1.5
XPCQ01831 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
XPCQ01831 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
XPCQ01831 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
XPCQ01831 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.68□□□□□ -1.5
XPCQ01831 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
XPCQ01831 RNU6-511P-201ENST00000363496 107 ntBASIC5.68□□□□□ -1.5
XPCQ01831 Y_RNA.157-201ENST00000363638 102 ntBASIC5.68□□□□□ -1.5
XPCQ01831 RNU6-996P-201ENST00000365438 107 ntBASIC5.68□□□□□ -1.5
XPCQ01831 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
XPCQ01831 RN7SKP156-201ENST00000410308 342 ntBASIC5.68□□□□□ -1.5
XPCQ01831 AC092447.6-201ENST00000414578 210 ntBASIC5.68□□□□□ -1.5
XPCQ01831 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
XPCQ01831 ATP5JP1-201ENST00000431631 322 ntBASIC5.68□□□□□ -1.5
XPCQ01831 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.68□□□□□ -1.5
XPCQ01831 CYCSP43-201ENST00000438233 310 ntBASIC5.68□□□□□ -1.5
XPCQ01831 MRPL48P1-201ENST00000445390 636 ntBASIC5.68□□□□□ -1.5
XPCQ01831 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.68□□□□□ -1.5
XPCQ01831 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.68□□□□□ -1.5
XPCQ01831 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.68□□□□□ -1.5
XPCQ01831 AC021146.3-201ENST00000511911 260 ntBASIC5.68□□□□□ -1.5
XPCQ01831 SNORD60.2-201ENST00000516883 86 ntBASIC5.68□□□□□ -1.5
XPCQ01831 SNORA70.24-201ENST00000517233 118 ntBASIC5.68□□□□□ -1.5
XPCQ01831 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.68□□□□□ -1.5
XPCQ01831 OR8L1P-201ENST00000534005 955 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms