Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC005951.2-201ENST00000576282 495 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 MTND1P15-201ENST00000579262 949 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.14□□□□□ -1.91
CX3CL1P78423 AP001029.3-201ENST00000588063 596 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AF038458.1-201ENST00000588406 262 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AL606834.2-201ENST00000602954 668 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 DUXAP4-201ENST00000603046 613 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AC020910.2-201ENST00000603635 610 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AC106900.2-201ENST00000604994 317 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AC091167.4-201ENST00000605079 184 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AP000860.1-201ENST00000605250 559 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AL139286.2-201ENST00000606838 396 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.14□□□□□ -1.91
CX3CL1P78423 AP000254.1-201ENST00000609934 520 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AC103710.1-201ENST00000610003 901 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AC104073.3-201ENST00000610942 955 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AL589743.7-201ENST00000612637 233 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 HULC.1-201ENST00000612720 240 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AC006338.1-201ENST00000618453 749 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.14□□□□□ -1.91
CX3CL1P78423 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.14□□□□□ -1.91
CX3CL1P78423 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.14□□□□□ -1.91
CX3CL1P78423 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CX3CL1P78423 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.14□□□□□ -1.91
CX3CL1P78423 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
CX3CL1P78423 FARSBP1-201ENST00000435808 1778 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CX3CL1P78423 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CX3CL1P78423 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.14□□□□□ -1.91
CX3CL1P78423 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CX3CL1P78423 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CL1P78423 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CL1P78423 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CX3CL1P78423 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.13□□□□□ -1.91
CX3CL1P78423 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CL1P78423 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.13□□□□□ -1.91
CX3CL1P78423 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CL1P78423 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.13□□□□□ -1.91
CX3CL1P78423 OR1S2-201ENST00000302592 978 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 RNU1-13P-201ENST00000384499 162 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 RPL7P60-201ENST00000397636 735 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.13□□□□□ -1.91
CX3CL1P78423 RNU2-16P-201ENST00000410712 136 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 RNU2-62P-201ENST00000410868 191 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 HMGB3P23-201ENST00000414981 585 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.13□□□□□ -1.91
CX3CL1P78423 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.13□□□□□ -1.91
CX3CL1P78423 ISCA1P6-201ENST00000427740 390 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 USP9YP14-201ENST00000430663 563 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.13□□□□□ -1.91
CX3CL1P78423 AC119618.1-201ENST00000434191 222 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 KCTD9P3-201ENST00000434597 1169 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 OR4C10P-201ENST00000434991 931 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 AC104850.1-201ENST00000435940 476 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 RPS24P1-201ENST00000438550 371 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.13□□□□□ -1.91
CX3CL1P78423 TXNP1-201ENST00000441872 371 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 RANP8-201ENST00000444720 713 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.13□□□□□ -1.91
CX3CL1P78423 AL162151.2-201ENST00000448875 158 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 RPL21P11-201ENST00000461458 483 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 AL049874.1-201ENST00000489560 388 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 RNU6-405P-201ENST00000516637 110 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.13□□□□□ -1.91
CX3CL1P78423 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.13□□□□□ -1.91
CX3CL1P78423 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.13□□□□□ -1.91
CX3CL1P78423 SYF2P1-201ENST00000550658 413 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.13□□□□□ -1.91
CX3CL1P78423 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.13□□□□□ -1.91
CX3CL1P78423 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.13□□□□□ -1.91
CX3CL1P78423 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.13□□□□□ -1.91
CX3CL1P78423 AC099489.2-201ENST00000574976 260 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 ZNF415P1-201ENST00000582279 1166 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.13□□□□□ -1.91
CX3CL1P78423 AC008277.2-201ENST00000605196 797 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.13□□□□□ -1.91
CX3CL1P78423 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.13□□□□□ -1.91
CX3CL1P78423 AC008498.1-201ENST00000613012 531 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 MIR6810-201ENST00000622701 70 ntBASIC3.13□□□□□ -1.91
CX3CL1P78423 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.13□□□□□ -1.91
CX3CL1P78423 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CL1P78423 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CL1P78423 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CL1P78423 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CL1P78423 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CX3CL1P78423 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CX3CL1P78423 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.12□□□□□ -1.91
CX3CL1P78423 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CX3CL1P78423 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CX3CL1P78423 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CX3CL1P78423 OR5J1P-201ENST00000313544 939 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CL1P78423 RNU2-8P-201ENST00000410727 190 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 RPL30P2-201ENST00000414021 291 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CL1P78423 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CX3CL1P78423 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CL1P78423 AL159169.1-201ENST00000421119 127 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 USP9YP36-201ENST00000424581 829 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 AC008850.1-201ENST00000427546 362 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms