Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.8□□□□□ -1.8
RAE1P78406 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.8□□□□□ -1.8
RAE1P78406 OR4R1P-201ENST00000529879 463 ntBASIC3.8□□□□□ -1.8
RAE1P78406 MIR4284-201ENST00000578924 81 ntBASIC3.8□□□□□ -1.8
RAE1P78406 AC023575.1-201ENST00000580510 358 ntBASIC3.8□□□□□ -1.8
RAE1P78406 MIR3939-201ENST00000582614 106 ntBASIC3.8□□□□□ -1.8
RAE1P78406 MIR4293-201ENST00000584305 78 ntBASIC3.8□□□□□ -1.8
RAE1P78406 AC067959.1-201ENST00000604334 379 ntBASIC3.8□□□□□ -1.8
RAE1P78406 Z84480.1-201ENST00000605131 311 ntBASIC3.8□□□□□ -1.8
RAE1P78406 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.8□□□□□ -1.8
RAE1P78406 DUXAP9-208ENST00000622815 614 ntBASIC3.8□□□□□ -1.8
RAE1P78406 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.8□□□□□ -1.8
RAE1P78406 AL136313.1-201ENST00000624804 202 ntBASIC3.8□□□□□ -1.8
RAE1P78406 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
RAE1P78406 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RAE1P78406 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
RAE1P78406 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RAE1P78406 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RAE1P78406 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RAE1P78406 DDX10P1-201ENST00000448545 1933 ntBASIC3.8□□□□□ -1.8
RAE1P78406 ZNF680P1-201ENST00000436625 1469 ntBASIC3.79□□□□□ -1.8
RAE1P78406 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RAE1P78406 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RAE1P78406 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.79□□□□□ -1.8
RAE1P78406 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RAE1P78406 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.79□□□□□ -1.8
RAE1P78406 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RAE1P78406 Y_RNA.22-201ENST00000362492 102 ntBASIC3.79□□□□□ -1.8
RAE1P78406 RNA5SP130-201ENST00000364431 114 ntBASIC3.79□□□□□ -1.8
RAE1P78406 U3.15-201ENST00000365398 212 ntBASIC3.79□□□□□ -1.8
RAE1P78406 MIR1-2-201ENST00000384961 85 ntBASIC3.79□□□□□ -1.8
RAE1P78406 AC068050.1-201ENST00000394891 380 ntBASIC3.79□□□□□ -1.8
RAE1P78406 MIR1251-201ENST00000408552 70 ntBASIC3.79□□□□□ -1.8
RAE1P78406 RNU6-908P-201ENST00000410160 94 ntBASIC3.79□□□□□ -1.8
RAE1P78406 RNU2-43P-201ENST00000410306 190 ntBASIC3.79□□□□□ -1.8
RAE1P78406 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.79□□□□□ -1.8
RAE1P78406 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.79□□□□□ -1.8
RAE1P78406 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.79□□□□□ -1.8
RAE1P78406 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RAE1P78406 HMGB3P12-201ENST00000438745 556 ntBASIC3.79□□□□□ -1.8
RAE1P78406 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.79□□□□□ -1.8
RAE1P78406 AL121871.1-201ENST00000443413 436 ntBASIC3.79□□□□□ -1.8
RAE1P78406 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.79□□□□□ -1.8
RAE1P78406 DPPA3P1-201ENST00000448050 469 ntBASIC3.79□□□□□ -1.8
RAE1P78406 AL162389.1-201ENST00000449233 177 ntBASIC3.79□□□□□ -1.8
RAE1P78406 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.79□□□□□ -1.8
RAE1P78406 AC007537.2-201ENST00000472093 511 ntBASIC3.79□□□□□ -1.8
RAE1P78406 AC006463.2-201ENST00000473326 348 ntBASIC3.79□□□□□ -1.8
RAE1P78406 S100A11P1-201ENST00000477525 312 ntBASIC3.79□□□□□ -1.8
RAE1P78406 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.79□□□□□ -1.8
RAE1P78406 RPS29P25-201ENST00000481709 171 ntBASIC3.79□□□□□ -1.8
RAE1P78406 AC069439.1-201ENST00000494739 167 ntBASIC3.79□□□□□ -1.8
RAE1P78406 AC083829.1-201ENST00000503756 657 ntBASIC3.79□□□□□ -1.8
RAE1P78406 HSPD1P15-201ENST00000505573 1122 ntBASIC3.79□□□□□ -1.8
RAE1P78406 AC074344.1-201ENST00000512823 224 ntBASIC3.79□□□□□ -1.8
RAE1P78406 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.79□□□□□ -1.8
RAE1P78406 SNORA40.12-201ENST00000516329 111 ntBASIC3.79□□□□□ -1.8
RAE1P78406 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.79□□□□□ -1.8
RAE1P78406 AC100870.1-201ENST00000522035 505 ntBASIC3.79□□□□□ -1.8
RAE1P78406 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.79□□□□□ -1.8
RAE1P78406 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RAE1P78406 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.79□□□□□ -1.8
RAE1P78406 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.79□□□□□ -1.8
RAE1P78406 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.79□□□□□ -1.8
RAE1P78406 AC128657.1-201ENST00000549459 145 ntBASIC3.79□□□□□ -1.8
RAE1P78406 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.79□□□□□ -1.8
RAE1P78406 AC025884.1-201ENST00000556034 378 ntBASIC3.79□□□□□ -1.8
RAE1P78406 MIR4700-201ENST00000578311 74 ntBASIC3.79□□□□□ -1.8
RAE1P78406 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.79□□□□□ -1.8
RAE1P78406 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.79□□□□□ -1.8
RAE1P78406 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RAE1P78406 AL353748.2-201ENST00000622148 471 ntBASIC3.79□□□□□ -1.8
RAE1P78406 FER-210ENST00000628534 558 ntTSL 5 BASIC3.79□□□□□ -1.8
RAE1P78406 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RAE1P78406 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RAE1P78406 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
RAE1P78406 UBE3AP2-201ENST00000429033 2259 ntBASIC3.79□□□□□ -1.8
RAE1P78406 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.79□□□□□ -1.8
RAE1P78406 AL365440.1-201ENST00000436135 2167 ntBASIC3.79□□□□□ -1.8
RAE1P78406 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
RAE1P78406 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RAE1P78406 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RAE1P78406 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RAE1P78406 BDP1P-201ENST00000582658 1990 ntBASIC3.78□□□□□ -1.8
RAE1P78406 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RAE1P78406 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RAE1P78406 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RAE1P78406 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.78□□□□□ -1.8
RAE1P78406 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
RAE1P78406 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RAE1P78406 RNU6-867P-201ENST00000364956 107 ntBASIC3.78□□□□□ -1.8
RAE1P78406 Y_RNA.303-201ENST00000364998 94 ntBASIC3.78□□□□□ -1.8
RAE1P78406 Y_RNA.367-201ENST00000365544 101 ntBASIC3.78□□□□□ -1.8
RAE1P78406 RNU6-877P-201ENST00000383868 107 ntBASIC3.78□□□□□ -1.8
RAE1P78406 RNU6-606P-201ENST00000384721 111 ntBASIC3.78□□□□□ -1.8
RAE1P78406 AL136372.1-201ENST00000403060 228 ntBASIC3.78□□□□□ -1.8
RAE1P78406 RNU2-9P-201ENST00000410194 145 ntBASIC3.78□□□□□ -1.8
RAE1P78406 AC016769.2-201ENST00000414815 475 ntBASIC3.78□□□□□ -1.8
RAE1P78406 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.78□□□□□ -1.8
RAE1P78406 UBE2FP1-201ENST00000416536 447 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms