Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RN7SKP219-201ENST00000516825 296 ntBASIC1.75□□□□□ -2.13
UBA52P62987 SNORA31.20-201ENST00000517111 133 ntBASIC1.75□□□□□ -2.13
UBA52P62987 HMGB1P46-201ENST00000520062 610 ntBASIC1.75□□□□□ -2.13
UBA52P62987 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.75□□□□□ -2.13
UBA52P62987 MTND4LP24-201ENST00000572277 291 ntBASIC1.75□□□□□ -2.13
UBA52P62987 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.75□□□□□ -2.13
UBA52P62987 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.75□□□□□ -2.13
UBA52P62987 AC092474.3-201ENST00000603022 568 ntBASIC1.75□□□□□ -2.13
UBA52P62987 AL136363.1-201ENST00000605349 337 ntBASIC1.75□□□□□ -2.13
UBA52P62987 AC009318.2-201ENST00000610917 651 ntBASIC1.75□□□□□ -2.13
UBA52P62987 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.75□□□□□ -2.13
UBA52P62987 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
UBA52P62987 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
UBA52P62987 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.74□□□□□ -2.13
UBA52P62987 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
UBA52P62987 SNORA46.1-201ENST00000391069 153 ntBASIC1.74□□□□□ -2.13
UBA52P62987 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
UBA52P62987 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.74□□□□□ -2.13
UBA52P62987 AL591719.1-201ENST00000444669 744 ntBASIC1.74□□□□□ -2.13
UBA52P62987 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.74□□□□□ -2.13
UBA52P62987 HMGB1P48-201ENST00000446155 598 ntBASIC1.74□□□□□ -2.13
UBA52P62987 MTCYBP14-201ENST00000457471 715 ntBASIC1.74□□□□□ -2.13
UBA52P62987 snoU13.4-201ENST00000458916 104 ntBASIC1.74□□□□□ -2.13
UBA52P62987 AC072039.1-201ENST00000477611 581 ntBASIC1.74□□□□□ -2.13
UBA52P62987 CKS1BP2-201ENST00000497342 240 ntBASIC1.74□□□□□ -2.13
UBA52P62987 RPL38P4-201ENST00000502376 214 ntBASIC1.74□□□□□ -2.13
UBA52P62987 AC117522.2-201ENST00000510049 657 ntBASIC1.74□□□□□ -2.13
UBA52P62987 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.74□□□□□ -2.13
UBA52P62987 SCARNA16.3-201ENST00000516595 184 ntBASIC1.74□□□□□ -2.13
UBA52P62987 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.74□□□□□ -2.13
UBA52P62987 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.74□□□□□ -2.13
UBA52P62987 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.74□□□□□ -2.13
UBA52P62987 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.74□□□□□ -2.13
UBA52P62987 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.74□□□□□ -2.13
UBA52P62987 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.74□□□□□ -2.13
UBA52P62987 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.74□□□□□ -2.13
UBA52P62987 OR1M4P-201ENST00000589199 287 ntBASIC1.74□□□□□ -2.13
UBA52P62987 AL590099.1-201ENST00000615276 138 ntBASIC1.74□□□□□ -2.13
UBA52P62987 AC010378.1-201ENST00000619270 362 ntBASIC1.74□□□□□ -2.13
UBA52P62987 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.74□□□□□ -2.13
UBA52P62987 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.74□□□□□ -2.13
UBA52P62987 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
UBA52P62987 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
UBA52P62987 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
UBA52P62987 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
UBA52P62987 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.73□□□□□ -2.13
UBA52P62987 RPS4XP3-201ENST00000398541 413 ntBASIC1.73□□□□□ -2.13
UBA52P62987 AL121972.1-201ENST00000402023 252 ntBASIC1.73□□□□□ -2.13
UBA52P62987 ATP5F1P6-201ENST00000402768 767 ntBASIC1.73□□□□□ -2.13
UBA52P62987 AL023284.1-201ENST00000403956 276 ntBASIC1.73□□□□□ -2.13
UBA52P62987 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.73□□□□□ -2.13
UBA52P62987 AC244033.1-201ENST00000426826 870 ntBASIC1.73□□□□□ -2.13
UBA52P62987 AC004866.2-201ENST00000438285 481 ntBASIC1.73□□□□□ -2.13
UBA52P62987 AL445687.1-201ENST00000439946 251 ntBASIC1.73□□□□□ -2.13
UBA52P62987 AC009237.8-201ENST00000445492 379 ntBASIC1.73□□□□□ -2.13
UBA52P62987 RPL7P12-201ENST00000446719 750 ntBASIC1.73□□□□□ -2.13
UBA52P62987 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.73□□□□□ -2.13
UBA52P62987 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.73□□□□□ -2.13
UBA52P62987 AC106872.3-201ENST00000495104 446 ntBASIC1.73□□□□□ -2.13
UBA52P62987 MTND4P2-201ENST00000507767 1203 ntBASIC1.73□□□□□ -2.13
UBA52P62987 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.73□□□□□ -2.13
UBA52P62987 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
UBA52P62987 OR5BM1P-201ENST00000512021 366 ntBASIC1.73□□□□□ -2.13
UBA52P62987 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.73□□□□□ -2.13
UBA52P62987 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.73□□□□□ -2.13
UBA52P62987 RNU6-295P-201ENST00000516901 104 ntBASIC1.73□□□□□ -2.13
UBA52P62987 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.73□□□□□ -2.13
UBA52P62987 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.73□□□□□ -2.13
UBA52P62987 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.73□□□□□ -2.13
UBA52P62987 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
UBA52P62987 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.73□□□□□ -2.13
UBA52P62987 AL049838.1-201ENST00000563647 981 ntBASIC1.73□□□□□ -2.13
UBA52P62987 MIR3122-201ENST00000577243 73 ntBASIC1.73□□□□□ -2.13
UBA52P62987 AC008749.1-201ENST00000597650 306 ntBASIC1.73□□□□□ -2.13
UBA52P62987 AC135178.6-201ENST00000605314 398 ntBASIC1.73□□□□□ -2.13
UBA52P62987 AC103710.2-201ENST00000609912 942 ntBASIC1.73□□□□□ -2.13
UBA52P62987 HMGB1P24-202ENST00000615653 685 ntBASIC1.73□□□□□ -2.13
UBA52P62987 AC104307.1-201ENST00000616142 196 ntBASIC1.73□□□□□ -2.13
UBA52P62987 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
UBA52P62987 AC009812.4-201ENST00000569134 1805 ntBASIC1.73□□□□□ -2.13
UBA52P62987 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBA52P62987 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBA52P62987 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
UBA52P62987 SNORA81-201ENST00000408493 178 ntBASIC1.72□□□□□ -2.13
UBA52P62987 RNA5SP489-201ENST00000410986 109 ntBASIC1.72□□□□□ -2.13
UBA52P62987 PTP4A1P7-201ENST00000423476 514 ntBASIC1.72□□□□□ -2.13
UBA52P62987 OR4K11P-201ENST00000431829 904 ntBASIC1.72□□□□□ -2.13
UBA52P62987 AC096992.1-201ENST00000459808 709 ntBASIC1.72□□□□□ -2.13
UBA52P62987 OR52A4P-203ENST00000498233 1014 ntBASIC1.72□□□□□ -2.13
UBA52P62987 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
UBA52P62987 HMGN1P28-201ENST00000521340 364 ntBASIC1.72□□□□□ -2.13
UBA52P62987 OR10V3P-201ENST00000525712 725 ntBASIC1.72□□□□□ -2.13
UBA52P62987 TRAV28-201ENST00000557548 323 ntBASIC1.72□□□□□ -2.13
UBA52P62987 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.72□□□□□ -2.13
UBA52P62987 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.72□□□□□ -2.13
UBA52P62987 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.72□□□□□ -2.13
UBA52P62987 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.72□□□□□ -2.13
UBA52P62987 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBA52P62987 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
UBA52P62987 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms