Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.03□□□□□ -2.08
AP3S2P59780 RPS29P26-201ENST00000477483 171 ntBASIC2.03□□□□□ -2.08
AP3S2P59780 SNORA48.10-201ENST00000516965 160 ntBASIC2.03□□□□□ -2.08
AP3S2P59780 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
AP3S2P59780 TRAV11-201ENST00000539512 339 ntBASIC2.03□□□□□ -2.08
AP3S2P59780 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.03□□□□□ -2.08
AP3S2P59780 AC011611.5-201ENST00000552477 578 ntBASIC2.03□□□□□ -2.08
AP3S2P59780 AL138976.2-201ENST00000563989 694 ntBASIC2.03□□□□□ -2.08
AP3S2P59780 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.03□□□□□ -2.08
AP3S2P59780 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.03□□□□□ -2.08
AP3S2P59780 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.03□□□□□ -2.08
AP3S2P59780 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.03□□□□□ -2.08
AP3S2P59780 AC021749.1-201ENST00000604322 607 ntBASIC2.03□□□□□ -2.08
AP3S2P59780 AL159169.3-201ENST00000608871 561 ntBASIC2.03□□□□□ -2.08
AP3S2P59780 AC090132.2-201ENST00000615881 347 ntBASIC2.03□□□□□ -2.08
AP3S2P59780 AC011330.2-201ENST00000621680 635 ntBASIC2.03□□□□□ -2.08
AP3S2P59780 AL359851.1-201ENST00000569460 4997 ntBASIC2.03□□□□□ -2.08
AP3S2P59780 AL049641.1-201ENST00000441055 1948 ntBASIC2.03□□□□□ -2.08
AP3S2P59780 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
AP3S2P59780 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
AP3S2P59780 OR4G11P-202ENST00000642116 1414 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 SNORA18.3-201ENST00000384122 132 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 MIR17-201ENST00000385012 84 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 MIR325-201ENST00000385260 98 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 RNU2-43P-201ENST00000410306 190 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 NDUFB4P7-201ENST00000423198 363 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.02□□□□□ -2.09
AP3S2P59780 EEF1B2P7-201ENST00000451177 676 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.02□□□□□ -2.09
AP3S2P59780 LINC00888-204ENST00000487386 421 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 AC022493.1-201ENST00000492984 337 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 GTF2IP9-201ENST00000502460 301 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.02□□□□□ -2.09
AP3S2P59780 AC010374.2-201ENST00000512933 535 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.02□□□□□ -2.09
AP3S2P59780 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.02□□□□□ -2.09
AP3S2P59780 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.02□□□□□ -2.09
AP3S2P59780 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.02□□□□□ -2.09
AP3S2P59780 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.02□□□□□ -2.09
AP3S2P59780 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.02□□□□□ -2.09
AP3S2P59780 GAS5-AS1-201ENST00000602767 694 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 AC013553.2-201ENST00000604244 589 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 AL450336.1-201ENST00000605180 586 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 MIR6748-201ENST00000610433 71 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.02□□□□□ -2.09
AP3S2P59780 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.02□□□□□ -2.09
AP3S2P59780 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.02□□□□□ -2.09
AP3S2P59780 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 AC097714.1-201ENST00000511272 1647 ntBASIC2.02□□□□□ -2.09
AP3S2P59780 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
AP3S2P59780 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
AP3S2P59780 SNORA16B-201ENST00000364674 135 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 RNU1-140P-201ENST00000365040 165 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.01□□□□□ -2.09
AP3S2P59780 RNU4-52P-201ENST00000384209 138 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 SNORA51.11-201ENST00000384442 131 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 AL445529.1-201ENST00000398713 389 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 OR51A3P-201ENST00000413596 924 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.01□□□□□ -2.09
AP3S2P59780 AC236972.1-201ENST00000433225 199 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.01□□□□□ -2.09
AP3S2P59780 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.01□□□□□ -2.09
AP3S2P59780 AC090515.1-201ENST00000465295 476 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 AC004263.1-201ENST00000479327 332 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 AC093663.2-201ENST00000484625 313 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.01□□□□□ -2.09
AP3S2P59780 AC113420.1-201ENST00000507903 571 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 RNU5F-8P-201ENST00000515941 111 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 RNU7-193P-201ENST00000516723 65 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 ARL2BPP5-201ENST00000523141 481 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
AP3S2P59780 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.01□□□□□ -2.09
AP3S2P59780 SETP7-201ENST00000552169 453 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.01□□□□□ -2.09
AP3S2P59780 AC087465.1-201ENST00000560574 245 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.01□□□□□ -2.09
AP3S2P59780 AC095057.3-201ENST00000567102 1157 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.01□□□□□ -2.09
AP3S2P59780 BPTFP1-201ENST00000579209 492 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.01□□□□□ -2.09
AP3S2P59780 AL031176.1-201ENST00000604554 466 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 AC025588.2-201ENST00000604851 466 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 AC120053.1-201ENST00000607706 736 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 AL161423.1-201ENST00000613700 262 ntBASIC2.01□□□□□ -2.09
AP3S2P59780 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
AP3S2P59780 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.01□□□□□ -2.09
AP3S2P59780 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
AP3S2P59780 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
AP3S2P59780 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.01□□□□□ -2.09
AP3S2P59780 AL109809.4-201ENST00000603520 2185 ntBASIC2□□□□□ -2.09
AP3S2P59780 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2□□□□□ -2.09
AP3S2P59780 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2□□□□□ -2.09
AP3S2P59780 SNORA51.6-201ENST00000384151 125 ntBASIC2□□□□□ -2.09
AP3S2P59780 MIR27B-201ENST00000385129 97 ntBASIC2□□□□□ -2.09
AP3S2P59780 SNORA46.1-201ENST00000391069 153 ntBASIC2□□□□□ -2.09
AP3S2P59780 ATP5F1P3-201ENST00000397213 657 ntBASIC2□□□□□ -2.09
AP3S2P59780 AL591416.1-201ENST00000404015 867 ntBASIC2□□□□□ -2.09
AP3S2P59780 HMGN2P38-201ENST00000423806 265 ntBASIC2□□□□□ -2.09
AP3S2P59780 AL050321.1-201ENST00000432363 400 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms