Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.54□□□□□ -2
CX3CR1P49238 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.54□□□□□ -2
CX3CR1P49238 RNU6-420P-201ENST00000458780 107 ntBASIC2.54□□□□□ -2
CX3CR1P49238 MTCYBP17-201ENST00000503579 789 ntBASIC2.54□□□□□ -2
CX3CR1P49238 AC114981.1-201ENST00000503897 678 ntBASIC2.54□□□□□ -2
CX3CR1P49238 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.54□□□□□ -2
CX3CR1P49238 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.54□□□□□ -2
CX3CR1P49238 AC096571.1-202ENST00000506634 735 ntBASIC2.54□□□□□ -2
CX3CR1P49238 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.54□□□□□ -2
CX3CR1P49238 RNU6-276P-201ENST00000516114 96 ntBASIC2.54□□□□□ -2
CX3CR1P49238 PSMA2P1-201ENST00000526365 646 ntBASIC2.54□□□□□ -2
CX3CR1P49238 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.54□□□□□ -2
CX3CR1P49238 AC107016.2-201ENST00000547968 190 ntBASIC2.54□□□□□ -2
CX3CR1P49238 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.54□□□□□ -2
CX3CR1P49238 HIGD1AP17-201ENST00000554576 276 ntBASIC2.54□□□□□ -2
CX3CR1P49238 AC010620.2-201ENST00000600135 313 ntBASIC2.54□□□□□ -2
CX3CR1P49238 AP001429.1-201ENST00000602568 530 ntBASIC2.54□□□□□ -2
CX3CR1P49238 SRGNP1-201ENST00000603392 451 ntBASIC2.54□□□□□ -2
CX3CR1P49238 AC013553.2-201ENST00000604244 589 ntBASIC2.54□□□□□ -2
CX3CR1P49238 AC069304.2-201ENST00000605154 435 ntBASIC2.54□□□□□ -2
CX3CR1P49238 AC069545.1-201ENST00000605671 358 ntBASIC2.54□□□□□ -2
CX3CR1P49238 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.54□□□□□ -2
CX3CR1P49238 AC069200.1-201ENST00000609511 323 ntBASIC2.54□□□□□ -2
CX3CR1P49238 AL590099.1-201ENST00000615276 138 ntBASIC2.54□□□□□ -2
CX3CR1P49238 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.54□□□□□ -2
CX3CR1P49238 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.54□□□□□ -2
CX3CR1P49238 AP003485.1-201ENST00000625093 753 ntBASIC2.54□□□□□ -2
CX3CR1P49238 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.54□□□□□ -2
CX3CR1P49238 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.54□□□□□ -2
CX3CR1P49238 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.54□□□□□ -2
CX3CR1P49238 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CX3CR1P49238 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.53□□□□□ -2
CX3CR1P49238 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.53□□□□□ -2
CX3CR1P49238 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.53□□□□□ -2
CX3CR1P49238 AL356473.1-201ENST00000406203 1408 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AC005832.2-201ENST00000538921 1430 ntBASIC2.53□□□□□ -2
CX3CR1P49238 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CX3CR1P49238 FAM35BP-202ENST00000497389 3337 ntBASIC2.53□□□□□ -2
CX3CR1P49238 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CX3CR1P49238 RNU6-28P-201ENST00000362378 107 ntBASIC2.53□□□□□ -2
CX3CR1P49238 snoZ40.1-201ENST00000364540 72 ntBASIC2.53□□□□□ -2
CX3CR1P49238 SNORA40.2-201ENST00000390847 128 ntBASIC2.53□□□□□ -2
CX3CR1P49238 SNORA26.7-201ENST00000391288 122 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AL031679.1-201ENST00000400616 525 ntBASIC2.53□□□□□ -2
CX3CR1P49238 RN7SKP27-201ENST00000410684 333 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.53□□□□□ -2
CX3CR1P49238 MRPS36P1-201ENST00000421291 307 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.53□□□□□ -2
CX3CR1P49238 AC018630.2-202ENST00000422992 927 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AL139421.1-201ENST00000423010 169 ntBASIC2.53□□□□□ -2
CX3CR1P49238 NDUFB4P7-201ENST00000423198 363 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AC109583.1-201ENST00000432156 268 ntBASIC2.53□□□□□ -2
CX3CR1P49238 TAAR7P-201ENST00000436141 242 ntBASIC2.53□□□□□ -2
CX3CR1P49238 ARPC3P1-201ENST00000437218 533 ntBASIC2.53□□□□□ -2
CX3CR1P49238 RPL21P2-201ENST00000440049 481 ntBASIC2.53□□□□□ -2
CX3CR1P49238 MTND2P20-201ENST00000440805 661 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.53□□□□□ -2
CX3CR1P49238 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.53□□□□□ -2
CX3CR1P49238 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.53□□□□□ -2
CX3CR1P49238 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.53□□□□□ -2
CX3CR1P49238 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.53□□□□□ -2
CX3CR1P49238 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.53□□□□□ -2
CX3CR1P49238 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.53□□□□□ -2
CX3CR1P49238 AL049874.1-201ENST00000489560 388 ntBASIC2.53□□□□□ -2
CX3CR1P49238 TTC39CP1-201ENST00000512513 755 ntBASIC2.53□□□□□ -2
CX3CR1P49238 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.53□□□□□ -2
CX3CR1P49238 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.53□□□□□ -2
CX3CR1P49238 SLC2A13P1-201ENST00000531560 322 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AC090888.1-201ENST00000561335 1141 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AADACP1-206ENST00000561502 1193 ntBASIC2.53□□□□□ -2
CX3CR1P49238 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.53□□□□□ -2
CX3CR1P49238 AMZ2P1-203ENST00000565833 850 ntBASIC2.53□□□□□ -2
CX3CR1P49238 HMGB1P6-201ENST00000569046 646 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.53□□□□□ -2
CX3CR1P49238 AC090615.1-201ENST00000577519 154 ntBASIC2.53□□□□□ -2
CX3CR1P49238 VN1R78P-201ENST00000597393 564 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.53□□□□□ -2
CX3CR1P49238 AC006539.2-201ENST00000601729 572 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AC112220.2-201ENST00000605513 533 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AC004067.1-201ENST00000608733 700 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AL121652.1-201ENST00000608851 448 ntBASIC2.53□□□□□ -2
CX3CR1P49238 RNU6-1192P-201ENST00000612197 107 ntBASIC2.53□□□□□ -2
CX3CR1P49238 RNU6-489P-201ENST00000618289 107 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AC123767.1-202ENST00000620407 817 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AC010338.1-201ENST00000621823 717 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AC008443.7-201ENST00000622195 246 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.53□□□□□ -2
CX3CR1P49238 OR5H6-203ENST00000642105 978 ntBASIC2.53□□□□□ -2
CX3CR1P49238 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.53□□□□□ -2
CX3CR1P49238 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.53□□□□□ -2
CX3CR1P49238 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CX3CR1P49238 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.53□□□□□ -2.01
CX3CR1P49238 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.53□□□□□ -2.01
CX3CR1P49238 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CX3CR1P49238 AC009487.2-201ENST00000420969 6821 ntBASIC2.52□□□□□ -2.01
CX3CR1P49238 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
CX3CR1P49238 AC109315.1-201ENST00000584143 1347 ntBASIC2.52□□□□□ -2.01
CX3CR1P49238 MAPK10-266ENST00000641066 6555 ntBASIC2.52□□□□□ -2.01
CX3CR1P49238 RNA5SP374-201ENST00000362939 125 ntBASIC2.52□□□□□ -2.01
CX3CR1P49238 RNU5E-10P-201ENST00000363506 118 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms