Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC103783.1-201ENST00000520506 373 ntBASIC3.41□□□□□ -1.86
LHX1P48742 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.41□□□□□ -1.86
LHX1P48742 AP004247.1-201ENST00000531556 1289 ntBASIC3.41□□□□□ -1.86
LHX1P48742 AC013828.2-201ENST00000532487 235 ntBASIC3.41□□□□□ -1.86
LHX1P48742 SNRPGP16-201ENST00000533275 226 ntBASIC3.41□□□□□ -1.86
LHX1P48742 AC037471.2-201ENST00000564941 598 ntBASIC3.41□□□□□ -1.86
LHX1P48742 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.41□□□□□ -1.86
LHX1P48742 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.41□□□□□ -1.86
LHX1P48742 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.41□□□□□ -1.86
LHX1P48742 AC022146.1-201ENST00000595307 847 ntBASIC3.41□□□□□ -1.86
LHX1P48742 AL022099.1-201ENST00000604551 712 ntBASIC3.41□□□□□ -1.86
LHX1P48742 AC103710.4-201ENST00000609301 899 ntBASIC3.41□□□□□ -1.86
LHX1P48742 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.41□□□□□ -1.86
LHX1P48742 AC018692.3-201ENST00000623929 123 ntBASIC3.41□□□□□ -1.86
LHX1P48742 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.41□□□□□ -1.86
LHX1P48742 PCMTD1P7-201ENST00000634506 357 ntBASIC3.41□□□□□ -1.86
LHX1P48742 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LHX1P48742 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LHX1P48742 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LHX1P48742 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LHX1P48742 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LHX1P48742 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LHX1P48742 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.41□□□□□ -1.86
LHX1P48742 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LHX1P48742 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LHX1P48742 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.4□□□□□ -1.86
LHX1P48742 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LHX1P48742 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
LHX1P48742 MTCO1P9-201ENST00000505577 1534 ntBASIC3.4□□□□□ -1.86
LHX1P48742 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.4□□□□□ -1.86
LHX1P48742 AL021368.2-201ENST00000606125 5352 ntBASIC3.4□□□□□ -1.86
LHX1P48742 FRG1BP-201ENST00000278882 761 ntBASIC3.4□□□□□ -1.87
LHX1P48742 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
LHX1P48742 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
LHX1P48742 RNU6-173P-201ENST00000364215 104 ntBASIC3.4□□□□□ -1.87
LHX1P48742 Y_RNA.548-201ENST00000384656 105 ntBASIC3.4□□□□□ -1.87
LHX1P48742 MIR483-201ENST00000385070 76 ntBASIC3.4□□□□□ -1.87
LHX1P48742 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
LHX1P48742 AC007899.1-201ENST00000412776 775 ntBASIC3.4□□□□□ -1.87
LHX1P48742 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.4□□□□□ -1.87
LHX1P48742 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.4□□□□□ -1.87
LHX1P48742 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.4□□□□□ -1.87
LHX1P48742 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.4□□□□□ -1.87
LHX1P48742 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.4□□□□□ -1.87
LHX1P48742 CCDC58P2-201ENST00000417131 366 ntBASIC3.4□□□□□ -1.87
LHX1P48742 SSXP9-201ENST00000417503 292 ntBASIC3.4□□□□□ -1.87
LHX1P48742 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.4□□□□□ -1.87
LHX1P48742 AL365203.2-201ENST00000423444 196 ntBASIC3.4□□□□□ -1.87
LHX1P48742 RSU1P2-202ENST00000437884 485 ntBASIC3.4□□□□□ -1.87
LHX1P48742 MTND1P26-201ENST00000440488 538 ntBASIC3.4□□□□□ -1.87
LHX1P48742 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.4□□□□□ -1.87
LHX1P48742 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.4□□□□□ -1.87
LHX1P48742 SNORD121B-201ENST00000458838 81 ntBASIC3.4□□□□□ -1.87
LHX1P48742 RPS4XP13-201ENST00000483219 789 ntBASIC3.4□□□□□ -1.87
LHX1P48742 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.4□□□□□ -1.87
LHX1P48742 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.4□□□□□ -1.87
LHX1P48742 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.4□□□□□ -1.87
LHX1P48742 AC012435.1-202ENST00000568772 240 ntBASIC3.4□□□□□ -1.87
LHX1P48742 AC034268.2-201ENST00000571784 482 ntBASIC3.4□□□□□ -1.87
LHX1P48742 MIR544B-201ENST00000582372 78 ntBASIC3.4□□□□□ -1.87
LHX1P48742 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LHX1P48742 AP001330.4-201ENST00000604350 154 ntBASIC3.4□□□□□ -1.87
LHX1P48742 AC107214.2-201ENST00000608204 634 ntBASIC3.4□□□□□ -1.87
LHX1P48742 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.4□□□□□ -1.87
LHX1P48742 uc_338.25-201ENST00000613756 156 ntBASIC3.4□□□□□ -1.87
LHX1P48742 AL603755.1-201ENST00000619504 163 ntBASIC3.4□□□□□ -1.87
LHX1P48742 AC073476.4-201ENST00000628409 72 ntBASIC3.4□□□□□ -1.87
LHX1P48742 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.4□□□□□ -1.87
LHX1P48742 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LHX1P48742 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LHX1P48742 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.4□□□□□ -1.87
LHX1P48742 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
LHX1P48742 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LHX1P48742 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
LHX1P48742 RNU6-500P-201ENST00000362349 107 ntBASIC3.39□□□□□ -1.87
LHX1P48742 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
LHX1P48742 SNORA7.4-201ENST00000384249 137 ntBASIC3.39□□□□□ -1.87
LHX1P48742 RNU6-882P-201ENST00000391025 103 ntBASIC3.39□□□□□ -1.87
LHX1P48742 RNU2-43P-201ENST00000410306 190 ntBASIC3.39□□□□□ -1.87
LHX1P48742 USP9YP26-201ENST00000421008 661 ntBASIC3.39□□□□□ -1.87
LHX1P48742 MTCO1P39-201ENST00000426148 480 ntBASIC3.39□□□□□ -1.87
LHX1P48742 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.39□□□□□ -1.87
LHX1P48742 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.39□□□□□ -1.87
LHX1P48742 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.39□□□□□ -1.87
LHX1P48742 RAC1P7-201ENST00000445367 377 ntBASIC3.39□□□□□ -1.87
LHX1P48742 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.39□□□□□ -1.87
LHX1P48742 AC104308.1-201ENST00000454621 333 ntBASIC3.39□□□□□ -1.87
LHX1P48742 RPL23AP31-201ENST00000456160 467 ntBASIC3.39□□□□□ -1.87
LHX1P48742 CFTRP1-201ENST00000456646 183 ntBASIC3.39□□□□□ -1.87
LHX1P48742 OR6K1P-201ENST00000456766 971 ntBASIC3.39□□□□□ -1.87
LHX1P48742 AC010401.1-201ENST00000463867 348 ntBASIC3.39□□□□□ -1.87
LHX1P48742 RPL30P6-201ENST00000475925 342 ntBASIC3.39□□□□□ -1.87
LHX1P48742 RPF2P2-201ENST00000504693 896 ntBASIC3.39□□□□□ -1.87
LHX1P48742 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.39□□□□□ -1.87
LHX1P48742 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LHX1P48742 MTCO2P32-201ENST00000514865 403 ntBASIC3.39□□□□□ -1.87
LHX1P48742 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.39□□□□□ -1.87
LHX1P48742 SNORA74D-201ENST00000516404 141 ntBASIC3.39□□□□□ -1.87
LHX1P48742 AP003497.1-201ENST00000528472 562 ntBASIC3.39□□□□□ -1.87
LHX1P48742 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms