Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 RPL31P50-201ENST00000471002 296 ntBASIC3.68□□□□□ -1.82
USP8P40818 AP000797.1-201ENST00000478870 387 ntBASIC3.68□□□□□ -1.82
USP8P40818 FAM172BP-201ENST00000487497 1089 ntBASIC3.68□□□□□ -1.82
USP8P40818 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.68□□□□□ -1.82
USP8P40818 POU5F1P7-201ENST00000508759 541 ntBASIC3.68□□□□□ -1.82
USP8P40818 RNA5SP216-201ENST00000516111 123 ntBASIC3.68□□□□□ -1.82
USP8P40818 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
USP8P40818 AP002748.2-201ENST00000528671 348 ntBASIC3.68□□□□□ -1.82
USP8P40818 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.68□□□□□ -1.82
USP8P40818 AC024224.1-201ENST00000538284 609 ntBASIC3.68□□□□□ -1.82
USP8P40818 AC091489.2-201ENST00000566263 604 ntBASIC3.68□□□□□ -1.82
USP8P40818 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.68□□□□□ -1.82
USP8P40818 MIR5186-201ENST00000577504 120 ntBASIC3.68□□□□□ -1.82
USP8P40818 MIR4474-201ENST00000579189 78 ntBASIC3.68□□□□□ -1.82
USP8P40818 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.68□□□□□ -1.82
USP8P40818 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.68□□□□□ -1.82
USP8P40818 AC067852.3-201ENST00000589177 561 ntBASIC3.68□□□□□ -1.82
USP8P40818 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.68□□□□□ -1.82
USP8P40818 AC068790.2-201ENST00000602601 557 ntBASIC3.68□□□□□ -1.82
USP8P40818 HMGN2P28-201ENST00000606102 262 ntBASIC3.68□□□□□ -1.82
USP8P40818 AL159169.3-201ENST00000608871 561 ntBASIC3.68□□□□□ -1.82
USP8P40818 AC006023.2-201ENST00000609916 167 ntBASIC3.68□□□□□ -1.82
USP8P40818 AC013562.2-201ENST00000611632 603 ntBASIC3.68□□□□□ -1.82
USP8P40818 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.68□□□□□ -1.82
USP8P40818 AC039056.2-201ENST00000622261 511 ntBASIC3.68□□□□□ -1.82
USP8P40818 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.68□□□□□ -1.82
USP8P40818 CYP3A51P-201ENST00000633513 256 ntBASIC3.68□□□□□ -1.82
USP8P40818 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP8P40818 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
USP8P40818 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP8P40818 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
USP8P40818 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP8P40818 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP8P40818 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
USP8P40818 AC004972.1-201ENST00000623934 2209 ntBASIC3.67□□□□□ -1.82
USP8P40818 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
USP8P40818 FGF7P2-201ENST00000332473 296 ntBASIC3.67□□□□□ -1.82
USP8P40818 RNA5SP197-201ENST00000363357 119 ntBASIC3.67□□□□□ -1.82
USP8P40818 SNORA62.3-201ENST00000365110 153 ntBASIC3.67□□□□□ -1.82
USP8P40818 RNU6-809P-201ENST00000384461 107 ntBASIC3.67□□□□□ -1.82
USP8P40818 MIR134-201ENST00000385258 73 ntBASIC3.67□□□□□ -1.82
USP8P40818 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP8P40818 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.67□□□□□ -1.82
USP8P40818 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.67□□□□□ -1.82
USP8P40818 RPS29P4-201ENST00000414733 161 ntBASIC3.67□□□□□ -1.82
USP8P40818 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.67□□□□□ -1.82
USP8P40818 RPS27AP14-201ENST00000422868 454 ntBASIC3.67□□□□□ -1.82
USP8P40818 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.67□□□□□ -1.82
USP8P40818 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USP8P40818 AL445669.1-201ENST00000426743 755 ntBASIC3.67□□□□□ -1.82
USP8P40818 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.67□□□□□ -1.82
USP8P40818 CYCSP4-201ENST00000429682 331 ntBASIC3.67□□□□□ -1.82
USP8P40818 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.67□□□□□ -1.82
USP8P40818 AC122718.1-201ENST00000439448 744 ntBASIC3.67□□□□□ -1.82
USP8P40818 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.67□□□□□ -1.82
USP8P40818 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.67□□□□□ -1.82
USP8P40818 RPL21P104-201ENST00000464143 478 ntBASIC3.67□□□□□ -1.82
USP8P40818 FAM133DP-201ENST00000464802 691 ntBASIC3.67□□□□□ -1.82
USP8P40818 AC090453.1-201ENST00000495560 436 ntBASIC3.67□□□□□ -1.82
USP8P40818 RNF138P1-201ENST00000502765 546 ntBASIC3.67□□□□□ -1.82
USP8P40818 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.67□□□□□ -1.82
USP8P40818 AC034159.1-201ENST00000513885 583 ntBASIC3.67□□□□□ -1.82
USP8P40818 AC116347.2-201ENST00000514912 523 ntBASIC3.67□□□□□ -1.82
USP8P40818 HIGD1AP3-201ENST00000515857 278 ntBASIC3.67□□□□□ -1.82
USP8P40818 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.67□□□□□ -1.82
USP8P40818 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.67□□□□□ -1.82
USP8P40818 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USP8P40818 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.67□□□□□ -1.82
USP8P40818 AP003033.1-201ENST00000527244 415 ntBASIC3.67□□□□□ -1.82
USP8P40818 AP004247.1-201ENST00000531556 1289 ntBASIC3.67□□□□□ -1.82
USP8P40818 MTND1P15-201ENST00000579262 949 ntBASIC3.67□□□□□ -1.82
USP8P40818 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.67□□□□□ -1.82
USP8P40818 AC078795.2-201ENST00000602835 1252 ntBASIC3.67□□□□□ -1.82
USP8P40818 AP000403.1-201ENST00000603349 851 ntBASIC3.67□□□□□ -1.82
USP8P40818 AL109618.2-201ENST00000605527 211 ntBASIC3.67□□□□□ -1.82
USP8P40818 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USP8P40818 AC012442.3-202ENST00000636742 206 ntBASIC3.67□□□□□ -1.82
USP8P40818 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
USP8P40818 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.67□□□□□ -1.82
USP8P40818 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.66□□□□□ -1.82
USP8P40818 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP8P40818 RNU4-35P-201ENST00000362588 141 ntBASIC3.66□□□□□ -1.82
USP8P40818 SNORD56.3-201ENST00000363507 71 ntBASIC3.66□□□□□ -1.82
USP8P40818 SNORA75-201ENST00000384158 137 ntBASIC3.66□□□□□ -1.82
USP8P40818 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.66□□□□□ -1.82
USP8P40818 RN7SKP123-201ENST00000410732 291 ntBASIC3.66□□□□□ -1.82
USP8P40818 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.66□□□□□ -1.82
USP8P40818 BMS1P22-201ENST00000414726 313 ntBASIC3.66□□□□□ -1.82
USP8P40818 MTCO3P41-201ENST00000414801 328 ntBASIC3.66□□□□□ -1.82
USP8P40818 AL356968.1-201ENST00000416622 474 ntBASIC3.66□□□□□ -1.82
USP8P40818 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.66□□□□□ -1.82
USP8P40818 USP9YP14-201ENST00000430663 563 ntBASIC3.66□□□□□ -1.82
USP8P40818 ATP5JP1-201ENST00000431631 322 ntBASIC3.66□□□□□ -1.82
USP8P40818 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.66□□□□□ -1.82
USP8P40818 AC244505.4-201ENST00000434905 287 ntBASIC3.66□□□□□ -1.82
USP8P40818 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.66□□□□□ -1.82
USP8P40818 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.66□□□□□ -1.82
USP8P40818 RPL23AP33-201ENST00000442301 452 ntBASIC3.66□□□□□ -1.82
USP8P40818 SSXP5-201ENST00000443473 287 ntBASIC3.66□□□□□ -1.82
USP8P40818 AC008264.1-201ENST00000447612 367 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms