Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.07□□□□□ -1.6
NID1P14543 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NID1P14543 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NID1P14543 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.07□□□□□ -1.6
NID1P14543 Y_RNA.458-201ENST00000384240 102 ntBASIC5.07□□□□□ -1.6
NID1P14543 Y_RNA.533-201ENST00000384596 114 ntBASIC5.07□□□□□ -1.6
NID1P14543 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NID1P14543 AL590704.1-201ENST00000402856 794 ntBASIC5.07□□□□□ -1.6
NID1P14543 RNU6-325P-201ENST00000411132 105 ntBASIC5.07□□□□□ -1.6
NID1P14543 GPS2P1-201ENST00000411761 986 ntBASIC5.07□□□□□ -1.6
NID1P14543 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.07□□□□□ -1.6
NID1P14543 RPS15AP6-201ENST00000420703 385 ntBASIC5.07□□□□□ -1.6
NID1P14543 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.07□□□□□ -1.6
NID1P14543 AC006946.1-201ENST00000429106 328 ntBASIC5.07□□□□□ -1.6
NID1P14543 OR6D1P-201ENST00000436165 939 ntBASIC5.07□□□□□ -1.6
NID1P14543 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.07□□□□□ -1.6
NID1P14543 PTMAP6-201ENST00000439110 327 ntBASIC5.07□□□□□ -1.6
NID1P14543 AL450023.1-201ENST00000450868 751 ntBASIC5.07□□□□□ -1.6
NID1P14543 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.07□□□□□ -1.6
NID1P14543 AL359273.1-201ENST00000510918 627 ntBASIC5.07□□□□□ -1.6
NID1P14543 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.07□□□□□ -1.6
NID1P14543 RNU6-346P-201ENST00000516288 111 ntBASIC5.07□□□□□ -1.6
NID1P14543 IGKV2-38-201ENST00000517443 247 ntBASIC5.07□□□□□ -1.6
NID1P14543 AF186190.1-201ENST00000517470 480 ntBASIC5.07□□□□□ -1.6
NID1P14543 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.07□□□□□ -1.6
NID1P14543 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.07□□□□□ -1.6
NID1P14543 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.07□□□□□ -1.6
NID1P14543 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.07□□□□□ -1.6
NID1P14543 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.07□□□□□ -1.6
NID1P14543 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.07□□□□□ -1.6
NID1P14543 SULT1C2P2-201ENST00000562517 294 ntBASIC5.07□□□□□ -1.6
NID1P14543 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.07□□□□□ -1.6
NID1P14543 MRPS21P7-201ENST00000566937 238 ntBASIC5.07□□□□□ -1.6
NID1P14543 AC068790.4-201ENST00000602474 263 ntBASIC5.07□□□□□ -1.6
NID1P14543 AL158827.2-201ENST00000602494 330 ntBASIC5.07□□□□□ -1.6
NID1P14543 Z83818.1-201ENST00000603584 150 ntBASIC5.07□□□□□ -1.6
NID1P14543 AL691447.3-201ENST00000635020 330 ntBASIC5.07□□□□□ -1.6
NID1P14543 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NID1P14543 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NID1P14543 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.07□□□□□ -1.6
NID1P14543 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.07□□□□□ -1.6
NID1P14543 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NID1P14543 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NID1P14543 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NID1P14543 DDX10P1-201ENST00000448545 1933 ntBASIC5.07□□□□□ -1.6
NID1P14543 C4BPAP1-201ENST00000415474 1893 ntBASIC5.07□□□□□ -1.6
NID1P14543 AC006484.1-201ENST00000435086 1884 ntBASIC5.07□□□□□ -1.6
NID1P14543 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.07□□□□□ -1.6
NID1P14543 AL360270.2-201ENST00000562952 5985 ntBASIC5.07□□□□□ -1.6
NID1P14543 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
NID1P14543 AC100757.1-201ENST00000616872 1835 ntBASIC5.07□□□□□ -1.6
NID1P14543 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NID1P14543 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.06□□□□□ -1.6
NID1P14543 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
NID1P14543 Y_RNA.16-201ENST00000362421 102 ntBASIC5.06□□□□□ -1.6
NID1P14543 Y_RNA.27-201ENST00000362540 103 ntBASIC5.06□□□□□ -1.6
NID1P14543 RNU4-44P-201ENST00000363050 141 ntBASIC5.06□□□□□ -1.6
NID1P14543 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NID1P14543 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NID1P14543 AL591034.2-201ENST00000402839 359 ntBASIC5.06□□□□□ -1.6
NID1P14543 U3.42-201ENST00000408746 214 ntBASIC5.06□□□□□ -1.6
NID1P14543 CEACAMP1-201ENST00000434624 1035 ntBASIC5.06□□□□□ -1.6
NID1P14543 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.06□□□□□ -1.6
NID1P14543 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
NID1P14543 EEF1B2P6-201ENST00000445713 673 ntBASIC5.06□□□□□ -1.6
NID1P14543 AC239809.1-201ENST00000450470 217 ntBASIC5.06□□□□□ -1.6
NID1P14543 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.06□□□□□ -1.6
NID1P14543 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.06□□□□□ -1.6
NID1P14543 AC087190.1-201ENST00000484462 480 ntBASIC5.06□□□□□ -1.6
NID1P14543 AC107032.1-201ENST00000485945 480 ntBASIC5.06□□□□□ -1.6
NID1P14543 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.06□□□□□ -1.6
NID1P14543 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.06□□□□□ -1.6
NID1P14543 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.06□□□□□ -1.6
NID1P14543 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.06□□□□□ -1.6
NID1P14543 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.06□□□□□ -1.6
NID1P14543 SCARNA24.2-201ENST00000516968 130 ntBASIC5.06□□□□□ -1.6
NID1P14543 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.06□□□□□ -1.6
NID1P14543 MRPS36P4-201ENST00000534436 298 ntBASIC5.06□□□□□ -1.6
NID1P14543 AC093023.1-201ENST00000547375 507 ntBASIC5.06□□□□□ -1.6
NID1P14543 AC044860.2-201ENST00000561005 179 ntBASIC5.06□□□□□ -1.6
NID1P14543 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.06□□□□□ -1.6
NID1P14543 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.06□□□□□ -1.6
NID1P14543 MIR4643-201ENST00000577473 78 ntBASIC5.06□□□□□ -1.6
NID1P14543 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.06□□□□□ -1.6
NID1P14543 MIR5701-3-201ENST00000578890 82 ntBASIC5.06□□□□□ -1.6
NID1P14543 CPDP1-201ENST00000579660 283 ntBASIC5.06□□□□□ -1.6
NID1P14543 MIR5692A1-201ENST00000580523 69 ntBASIC5.06□□□□□ -1.6
NID1P14543 MIR4300-201ENST00000581016 96 ntBASIC5.06□□□□□ -1.6
NID1P14543 MIR5701-1-201ENST00000585138 82 ntBASIC5.06□□□□□ -1.6
NID1P14543 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.06□□□□□ -1.6
NID1P14543 AC005344.1-201ENST00000613391 459 ntBASIC5.06□□□□□ -1.6
NID1P14543 MIR5701-2-201ENST00000615634 82 ntBASIC5.06□□□□□ -1.6
NID1P14543 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NID1P14543 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NID1P14543 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NID1P14543 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NID1P14543 AC005183.1-201ENST00000603687 1979 ntBASIC5.05□□□□□ -1.6
NID1P14543 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NID1P14543 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NID1P14543 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms