Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RN7SL354P-201ENST00000469282 294 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXD8P13378 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD8P13378 AC021146.3-201ENST00000511911 260 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 RFPL4AP5-201ENST00000514977 504 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 AC131281.1-201ENST00000522984 164 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.41□□□□□ -1.54
HOXD8P13378 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXD8P13378 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXD8P13378 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXD8P13378 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXD8P13378 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXD8P13378 MIR5699-201ENST00000578903 90 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 AC005899.2-201ENST00000584353 90 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 PRPF19P1-201ENST00000584766 898 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 AL355297.3-201ENST00000604082 446 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXD8P13378 FAM27B-201ENST00000610601 213 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 SNHG22-203ENST00000617833 660 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD8P13378 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
HOXD8P13378 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD8P13378 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXD8P13378 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD8P13378 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD8P13378 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD8P13378 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD8P13378 AP005435.3-201ENST00000531260 3198 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
HOXD8P13378 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXD8P13378 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXD8P13378 SCARNA15-201ENST00000607520 4325 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXD8P13378 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXD8P13378 AL606537.1-201ENST00000607258 2011 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXD8P13378 AL590240.1-201ENST00000334118 313 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 RNU6-715P-201ENST00000365204 103 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 Y_RNA.396-201ENST00000383949 103 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 Y_RNA.485-201ENST00000384395 102 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 RNU6-95P-201ENST00000384697 107 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 MIR23A-201ENST00000385245 73 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HOXD8P13378 U3.29-201ENST00000391296 212 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 RPS4XP7-201ENST00000406274 780 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXD8P13378 RPL18P10-201ENST00000425606 538 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXD8P13378 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXD8P13378 AC068287.1-201ENST00000430283 295 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 USP9YP30-201ENST00000430729 455 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXD8P13378 OSTCP8-201ENST00000445117 448 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 CEACAMP6-201ENST00000452007 574 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 AC008481.1-201ENST00000463278 396 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXD8P13378 AC117503.1-201ENST00000472241 394 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 AP001086.1-201ENST00000494882 321 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXD8P13378 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXD8P13378 RNA5SP384-201ENST00000516615 116 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 Y_RNA.719-201ENST00000517156 106 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXD8P13378 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXD8P13378 AC025423.5-201ENST00000550230 219 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 AL049839.1-201ENST00000556151 657 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXD8P13378 AC078899.3-201ENST00000599065 212 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 AL121932.1-201ENST00000605542 214 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXD8P13378 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.4□□□□□ -1.54
HOXD8P13378 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
HOXD8P13378 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.4□□□□□ -1.55
HOXD8P13378 AL031119.1-201ENST00000404707 1879 ntBASIC5.4□□□□□ -1.55
HOXD8P13378 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HOXD8P13378 AC108751.5-201ENST00000492880 1336 ntBASIC5.4□□□□□ -1.55
HOXD8P13378 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXD8P13378 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.4□□□□□ -1.55
HOXD8P13378 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HOXD8P13378 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXD8P13378 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXD8P13378 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXD8P13378 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXD8P13378 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXD8P13378 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXD8P13378 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXD8P13378 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXD8P13378 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXD8P13378 SNORD113.2-201ENST00000364166 89 ntBASIC5.39□□□□□ -1.55
HOXD8P13378 Y_RNA.380-201ENST00000365663 111 ntBASIC5.39□□□□□ -1.55
HOXD8P13378 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXD8P13378 Y_RNA.399-201ENST00000383955 105 ntBASIC5.39□□□□□ -1.55
HOXD8P13378 SNORD51-201ENST00000384320 80 ntBASIC5.39□□□□□ -1.55
HOXD8P13378 AL139039.1-201ENST00000401900 692 ntBASIC5.39□□□□□ -1.55
HOXD8P13378 RNU4-65P-201ENST00000410473 140 ntBASIC5.39□□□□□ -1.55
HOXD8P13378 AC097713.2-201ENST00000430199 356 ntBASIC5.39□□□□□ -1.55
HOXD8P13378 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.39□□□□□ -1.55
HOXD8P13378 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXD8P13378 CYCSP24-201ENST00000445119 316 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms