Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SNORD42A-201ENST00000459584 64 ntBASIC3.85□□□□□ -1.79
MMP3P08254 AC084357.1-201ENST00000473404 255 ntBASIC3.85□□□□□ -1.79
MMP3P08254 RPS26P15-201ENST00000488067 348 ntBASIC3.85□□□□□ -1.79
MMP3P08254 RPL21P13-201ENST00000488305 481 ntBASIC3.85□□□□□ -1.79
MMP3P08254 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.85□□□□□ -1.79
MMP3P08254 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
MMP3P08254 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
MMP3P08254 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.85□□□□□ -1.79
MMP3P08254 FCF1P8-201ENST00000510322 597 ntBASIC3.85□□□□□ -1.79
MMP3P08254 CDC42P4-201ENST00000510507 563 ntBASIC3.85□□□□□ -1.79
MMP3P08254 FTH1P9-201ENST00000513251 355 ntBASIC3.85□□□□□ -1.79
MMP3P08254 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.85□□□□□ -1.79
MMP3P08254 AC008489.1-201ENST00000524271 483 ntBASIC3.85□□□□□ -1.79
MMP3P08254 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.85□□□□□ -1.79
MMP3P08254 AC009063.1-201ENST00000563342 702 ntBASIC3.85□□□□□ -1.79
MMP3P08254 AC010546.1-201ENST00000569391 485 ntBASIC3.85□□□□□ -1.79
MMP3P08254 MIR4298-201ENST00000584380 73 ntBASIC3.85□□□□□ -1.79
MMP3P08254 AC009977.1-201ENST00000586015 570 ntBASIC3.85□□□□□ -1.79
MMP3P08254 AL606834.2-201ENST00000602954 668 ntBASIC3.85□□□□□ -1.79
MMP3P08254 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.85□□□□□ -1.79
MMP3P08254 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.85□□□□□ -1.79
MMP3P08254 AC018755.4-201ENST00000619715 454 ntBASIC3.85□□□□□ -1.79
MMP3P08254 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.85□□□□□ -1.79
MMP3P08254 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
MMP3P08254 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.85□□□□□ -1.79
MMP3P08254 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.85□□□□□ -1.79
MMP3P08254 NMD3P1-201ENST00000439704 1488 ntBASIC3.85□□□□□ -1.79
MMP3P08254 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
MMP3P08254 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
MMP3P08254 AC092447.7-201ENST00000422212 1621 ntBASIC3.84□□□□□ -1.79
MMP3P08254 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
MMP3P08254 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.84□□□□□ -1.79
MMP3P08254 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
MMP3P08254 RNU6-1207P-201ENST00000384343 107 ntBASIC3.84□□□□□ -1.79
MMP3P08254 SNORA70E-201ENST00000384492 135 ntBASIC3.84□□□□□ -1.79
MMP3P08254 MIR153-1-201ENST00000384914 90 ntBASIC3.84□□□□□ -1.79
MMP3P08254 RNU6-648P-201ENST00000410190 107 ntBASIC3.84□□□□□ -1.79
MMP3P08254 RNU6-248P-201ENST00000410720 107 ntBASIC3.84□□□□□ -1.79
MMP3P08254 RNU6-195P-201ENST00000411352 109 ntBASIC3.84□□□□□ -1.79
MMP3P08254 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.84□□□□□ -1.79
MMP3P08254 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.84□□□□□ -1.79
MMP3P08254 AC004552.1-201ENST00000419089 348 ntBASIC3.84□□□□□ -1.79
MMP3P08254 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.84□□□□□ -1.79
MMP3P08254 CKS1BP5-201ENST00000434172 273 ntBASIC3.84□□□□□ -1.79
MMP3P08254 MRPS18BP2-201ENST00000434310 759 ntBASIC3.84□□□□□ -1.79
MMP3P08254 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.84□□□□□ -1.79
MMP3P08254 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.84□□□□□ -1.79
MMP3P08254 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.84□□□□□ -1.79
MMP3P08254 RPS20P32-201ENST00000456044 356 ntBASIC3.84□□□□□ -1.79
MMP3P08254 SRRM1P2-201ENST00000464531 1192 ntBASIC3.84□□□□□ -1.79
MMP3P08254 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.84□□□□□ -1.79
MMP3P08254 RPS26P3-201ENST00000470205 348 ntBASIC3.84□□□□□ -1.79
MMP3P08254 AC090543.2-201ENST00000483963 348 ntBASIC3.84□□□□□ -1.79
MMP3P08254 AC004057.1-201ENST00000485827 348 ntBASIC3.84□□□□□ -1.79
MMP3P08254 AC106872.2-201ENST00000494303 480 ntBASIC3.84□□□□□ -1.79
MMP3P08254 AC138853.1-201ENST00000503549 823 ntBASIC3.84□□□□□ -1.79
MMP3P08254 BTF3L4P4-201ENST00000506381 449 ntBASIC3.84□□□□□ -1.79
MMP3P08254 PHBP14-201ENST00000512887 367 ntBASIC3.84□□□□□ -1.79
MMP3P08254 RNU6-714P-201ENST00000516963 103 ntBASIC3.84□□□□□ -1.79
MMP3P08254 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.84□□□□□ -1.79
MMP3P08254 OR4P1P-201ENST00000530808 1136 ntBASIC3.84□□□□□ -1.79
MMP3P08254 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.84□□□□□ -1.79
MMP3P08254 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.84□□□□□ -1.79
MMP3P08254 AC137800.2-201ENST00000574375 120 ntBASIC3.84□□□□□ -1.79
MMP3P08254 MIR4276-201ENST00000584832 70 ntBASIC3.84□□□□□ -1.79
MMP3P08254 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.84□□□□□ -1.79
MMP3P08254 NDUFA8P1-201ENST00000605525 367 ntBASIC3.84□□□□□ -1.79
MMP3P08254 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.84□□□□□ -1.79
MMP3P08254 AC006329.2-201ENST00000611491 394 ntBASIC3.84□□□□□ -1.79
MMP3P08254 AL359740.1-201ENST00000624340 592 ntBASIC3.84□□□□□ -1.79
MMP3P08254 AC091925.2-201ENST00000625059 256 ntBASIC3.84□□□□□ -1.79
MMP3P08254 AC099654.13-201ENST00000639774 207 ntBASIC3.84□□□□□ -1.79
MMP3P08254 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
MMP3P08254 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.84□□□□□ -1.8
MMP3P08254 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.84□□□□□ -1.8
MMP3P08254 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
MMP3P08254 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
MMP3P08254 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.83□□□□□ -1.8
MMP3P08254 AC092125.1-201ENST00000562568 1995 ntBASIC3.83□□□□□ -1.8
MMP3P08254 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.83□□□□□ -1.8
MMP3P08254 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
MMP3P08254 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.83□□□□□ -1.8
MMP3P08254 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MMP3P08254 GNG5P1-201ENST00000255500 204 ntBASIC3.83□□□□□ -1.8
MMP3P08254 AL161781.1-201ENST00000354277 403 ntBASIC3.83□□□□□ -1.8
MMP3P08254 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
MMP3P08254 Y_RNA.608-201ENST00000410647 95 ntBASIC3.83□□□□□ -1.8
MMP3P08254 RNU4-78P-201ENST00000410940 126 ntBASIC3.83□□□□□ -1.8
MMP3P08254 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MMP3P08254 HMGB3P23-201ENST00000414981 585 ntBASIC3.83□□□□□ -1.8
MMP3P08254 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.83□□□□□ -1.8
MMP3P08254 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.83□□□□□ -1.8
MMP3P08254 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.83□□□□□ -1.8
MMP3P08254 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.83□□□□□ -1.8
MMP3P08254 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.83□□□□□ -1.8
MMP3P08254 RPL7P28-201ENST00000437739 740 ntBASIC3.83□□□□□ -1.8
MMP3P08254 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MMP3P08254 RPL22P17-201ENST00000438729 315 ntBASIC3.83□□□□□ -1.8
MMP3P08254 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.83□□□□□ -1.8
MMP3P08254 AL033528.1-201ENST00000453780 140 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms